(6R,2S)-Diaminopimelic acid
Title | Journal |
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Gordonia caeni sp. nov., isolated from sludge of a sewage disposal plant. | International journal of systematic and evolutionary microbiology 20121101 |
Tissue- and ligand-specific sensing of gram-negative infection in drosophila by PGRP-LC isoforms and PGRP-LE. | Journal of immunology (Baltimore, Md. : 1950) 20120815 |
Streptomyces phytohabitans sp. nov., a novel endophytic actinomycete isolated from medicinal plant Curcuma phaeocaulis. | Antonie van Leeuwenhoek 20120801 |
Nocardioides panzhihuaensis sp. nov., a novel endophytic actinomycete isolated from medicinal plant Jatropha curcas L. | Antonie van Leeuwenhoek 20120801 |
Nonomuraea soli sp. nov., an actinomycete isolated from soil. | International journal of systematic and evolutionary microbiology 20120701 |
Verrucosispora wenchangensis sp. nov., isolated from mangrove soil. | Antonie van Leeuwenhoek 20120601 |
Streptomyces manipurensis sp. nov., a novel actinomycete isolated from a limestone deposit site in Manipur, India. | Antonie van Leeuwenhoek 20120601 |
Thermoactinospora rubra gen. nov., sp. nov., a thermophilic actinomycete isolated from Tengchong, Yunnan province, south-west China. | Antonie van Leeuwenhoek 20120601 |
Phenotypic and genotypic characterization of Thai oral streptococci, lactobacilli and pediococci. | Tropical biomedicine 20120601 |
Proposal of Intrasporangium mesophilum sp. nov., and reclassification of Humihabitans oryzae Kageyama et al. 2007 as Intrasporangium oryzae comb. nov. | International journal of systematic and evolutionary microbiology 20120501 |
Kribbella amoyensis sp. nov., isolated from rhizosphere soil of a pharmaceutical plant, Typhonium giganteum Engl. | International journal of systematic and evolutionary microbiology 20120501 |
Actinomadura sediminis sp. nov., a marine actinomycete isolated from mangrove sediment. | International journal of systematic and evolutionary microbiology 20120501 |
Bacillus kochii sp. nov., isolated from foods and a pharmaceuticals manufacturing site. | International journal of systematic and evolutionary microbiology 20120501 |
Streptomyces pharmamarensis sp. nov. isolated from a marine sediment. | International journal of systematic and evolutionary microbiology 20120501 |
Nocardioides daejeonensis sp. nov., a denitrifying bacterium isolated from sludge in a sewage-disposal plant. | International journal of systematic and evolutionary microbiology 20120501 |
Cohnella boryungensis sp. nov., isolated from soil. | Antonie van Leeuwenhoek 20120501 |
Geodermatophilus nigrescens sp. nov., isolated from a dry-hot valley. | Antonie van Leeuwenhoek 20120501 |
Structure and function of Mycobacterium tuberculosis meso-diaminopimelic acid (DAP) biosynthetic enzymes. | FEMS microbiology letters 20120501 |
N-acetylglucosamine-6-phosphate deacetylase (NagA) of Listeria monocytogenes EGD, an essential enzyme for the metabolism and recycling of amino sugars. | Archives of microbiology 20120401 |
NOD1 and NOD2 stimulation triggers innate immune responses of human periodontal ligament cells. | International journal of molecular medicine 20120401 |
Streptomyces qinglanensis sp. nov., isolated from mangrove sediment. | International journal of systematic and evolutionary microbiology 20120301 |
Nocardioides ginsengagri sp. nov., isolated from the soil of a ginseng field. | International journal of systematic and evolutionary microbiology 20120301 |
Patulibacter ginsengiterrae sp. nov., isolated from soil of a ginseng field, and an emended description of the genus Patulibacter. | International journal of systematic and evolutionary microbiology 20120301 |
Aquipuribacter hungaricus gen. nov., sp. nov., an actinobacterium isolated from the ultrapure water system of a power plant. | International journal of systematic and evolutionary microbiology 20120301 |
Nocardia grenadensis sp. nov., isolated from sand of the Caribbean Sea. | International journal of systematic and evolutionary microbiology 20120301 |
A peptidoglycan fragment triggers β-lactam resistance in Bacillus licheniformis. | PLoS pathogens 20120301 |
Molecular structure and peptidoglycan recognition of Mycobacterium tuberculosis ArfA (Rv0899). | Journal of molecular biology 20120217 |
Actinoallomurus radicium sp. nov., isolated from the roots of two plant species. | International journal of systematic and evolutionary microbiology 20120201 |
Motilibacter peucedani gen. nov., sp. nov., isolated from rhizosphere soil. | International journal of systematic and evolutionary microbiology 20120201 |
The synthesis of active and stable diaminopimelate analogues of the lantibiotic peptide lactocin S. | Journal of the American Chemical Society 20120201 |
Laceyella sediminis sp. nov., a thermophilic bacterium isolated from a hot spring. | International journal of systematic and evolutionary microbiology 20120101 |
Saccharothrix yanglingensis sp. nov., an antagonistic endophytic actinomycete isolated from cucumber plant. | Antonie van Leeuwenhoek 20120101 |
Mechanism of anchoring of OmpA protein to the cell wall peptidoglycan of the gram-negative bacterial outer membrane. | FASEB journal : official publication of the Federation of American Societies for Experimental Biology 20120101 |
Nucleotide-binding oligomerization domain-1 and -2 play no role in controlling Brucella abortus infection in mice. | Clinical & developmental immunology 20120101 |
Genome engineering in Vibrio cholerae: a feasible approach to address biological issues. | PLoS genetics 20120101 |
Tetrahydrodipicolinate N-succinyltransferase and dihydrodipicolinate synthase from Pseudomonas aeruginosa: structure analysis and gene deletion. | PloS one 20120101 |
Reconstruction of Extracellular Respiratory Pathways for Iron(III) Reduction in Shewanella Oneidensis Strain MR-1. | Frontiers in microbiology 20120101 |
Construction of a baculovirus-silkworm multigene expression system and its application on producing virus-like particles. | PloS one 20120101 |
Characterization of LysB4, an endolysin from the Bacillus cereus-infecting bacteriophage B4. | BMC microbiology 20120101 |
A simple method for construction of pir+ Enterobacterial hosts for maintenance of R6K replicon plasmids. | BMC research notes 20120101 |
Genotype-phenotype associations in a nonmodel prokaryote. | mBio 20120101 |
The complete genome sequence of the acarbose producer Actinoplanes sp. SE50/110. | BMC genomics 20120101 |
Imaging of bubonic plague dynamics by in vivo tracking of bioluminescent Yersinia pestis. | PloS one 20120101 |
Vulnerabilities in Yersinia pestis caf operon are unveiled by a Salmonella vector. | PloS one 20120101 |
Selection of Salmonella enterica serovar Typhi genes involved during interaction with human macrophages by screening of a transposon mutant library. | PloS one 20120101 |
Explicit hypoxia targeting with tumor suppression by creating an 'obligate' anaerobic Salmonella Typhimurium strain. | Scientific reports 20120101 |
NOD-like receptors and RIG-I-like receptors in human eosinophils: activation by NOD1 and NOD2 agonists. | Immunology 20111101 |
Evidence-based annotation of gene function in Shewanella oneidensis MR-1 using genome-wide fitness profiling across 121 conditions. | PLoS genetics 20111101 |
Pseudokineococcus lusitanus gen. nov., sp. nov., and reclassification of Kineococcus marinus Lee 2006 as Pseudokineococcus marinus comb. nov. | International journal of systematic and evolutionary microbiology 20111001 |
Expression of TRAF6 and pro-inflammatory cytokines through activation of TLR2, TLR4, NOD1, and NOD2 in human periodontal ligament fibroblasts. | Archives of oral biology 20111001 |
Bacillus kyonggiensis sp. nov., isolated from soil of a lettuce field. | Journal of microbiology (Seoul, Korea) 20111001 |
Compensating stereochemical changes allow murein tripeptide to be accommodated in a conventional peptide-binding protein. | The Journal of biological chemistry 20110909 |
L-Ala-γ-D-Glu-meso-diaminopimelic acid (DAP) interacts directly with leucine-rich region domain of nucleotide-binding oligomerization domain 1, increasing phosphorylation activity of receptor-interacting serine/threonine-protein kinase 2 and its interaction with nucleotide-binding oligomerization domain 1. | The Journal of biological chemistry 20110902 |
Bacillus xiaoxiensis sp. nov., a slightly halophilic bacterium isolated from non-saline forest soil. | International journal of systematic and evolutionary microbiology 20110901 |
'Candidatus Pasteuria aldrichii', an obligate endoparasite of the bacterivorous nematode Bursilla. | International journal of systematic and evolutionary microbiology 20110901 |
Flindersiella endophytica gen. nov., sp. nov., an endophytic actinobacterium isolated from the root of Grey Box, an endemic eucalyptus tree. | International journal of systematic and evolutionary microbiology 20110901 |
Nocardioides iriomotensis sp. nov., an actinobacterium isolated from forest soil. | International journal of systematic and evolutionary microbiology 20110901 |
Actinomadura apis sp. nov., isolated from a honey bee (Apis mellifera) hive, and the reclassification of Actinomadura cremea subsp. rifamycini Gauze et al. 1987 as Actinomadura rifamycini (Gauze et al. 1987) sp. nov., comb. nov. | International journal of systematic and evolutionary microbiology 20110901 |
Propioniciclava tarda gen. nov., sp. nov., isolated from a methanogenic reactor treating waste from cattle farms. | International journal of systematic and evolutionary microbiology 20110901 |
Kroppenstedtia eburnea gen. nov., sp. nov., a thermoactinomycete isolated by environmental screening, and emended description of the family Thermoactinomycetaceae Matsuo et al. 2006 emend. Yassin et al. 2009. | International journal of systematic and evolutionary microbiology 20110901 |
Pseudonocardia kunmingensis sp. nov., an actinobacterium isolated from surface-sterilized roots of Artemisia annua L. | International journal of systematic and evolutionary microbiology 20110901 |
Dual diaminopimelate biosynthesis pathways in Bacteroides fragilis and Clostridium thermocellum. | Biochimica et biophysica acta 20110901 |
Mechanism of inhibition of Bacillus anthracis spore outgrowth by the lantibiotic nisin. | ACS chemical biology 20110715 |
Nod1 activation by bacterial iE-DAP induces maternal-fetal inflammation and preterm labor. | Journal of immunology (Baltimore, Md. : 1950) 20110715 |
Generation of two auxotrophic genes knock-out Edwardsiella tarda and assessment of its potential as a combined vaccine in olive flounder (Paralichthys olivaceus). | Fish & shellfish immunology 20110701 |
The extracytoplasmic domain of the Mycobacterium tuberculosis Ser/Thr kinase PknB binds specific muropeptides and is required for PknB localization. | PLoS pathogens 20110701 |
Serinicoccus chungangensis sp. nov., isolated from tidal flat sediment, and emended description of the genus Serinicoccus. | International journal of systematic and evolutionary microbiology 20110601 |
Nonomuraea wenchangensis sp. nov., isolated from mangrove rhizosphere soil. | International journal of systematic and evolutionary microbiology 20110601 |
Pseudonocardia bannaensis sp. nov., a novel actinomycete isolated from the surface-sterilized roots of Artemisia annua L. | Antonie van Leeuwenhoek 20110601 |
Roles of the spiA gene from Salmonella enteritidis in biofilm formation and virulence. | Microbiology (Reading, England) 20110601 |
Pseudonocardia mongoliensis sp. nov. and Pseudonocardia khuvsgulensis sp. nov., isolated from soil. | International journal of systematic and evolutionary microbiology 20110401 |
Actinoallomurus oryzae sp. nov., an endophytic actinomycete isolated from roots of a Thai jasmine rice plant. | International journal of systematic and evolutionary microbiology 20110401 |
Streptomyces aomiensis sp. nov., isolated from a soil sample using the membrane-filter method. | International journal of systematic and evolutionary microbiology 20110401 |
Bacillus nanhaiensis sp. nov., isolated from an oyster. | International journal of systematic and evolutionary microbiology 20110401 |
Actinophytocola timorensis sp. nov. and Actinophytocola corallina sp. nov., isolated from soil. | International journal of systematic and evolutionary microbiology 20110401 |
Amycolatopsis samaneae sp. nov., isolated from roots of Samanea saman (Jacq.) Merr. | International journal of systematic and evolutionary microbiology 20110401 |
Distinguishing the cyanobacterial neurotoxin β-N-methylamino-L-alanine (BMAA) from other diamino acids. | Toxicon : official journal of the International Society on Toxinology 20110401 |
Structures, synthesis, and human Nod1 stimulation of immunostimulatory bacterial peptidoglycan fragments in the environment. | Journal of natural products 20110325 |
Structure-activity relationships in nucleotide oligomerization domain 1 (Nod1) agonistic γ-glutamyldiaminopimelic acid derivatives. | Journal of medicinal chemistry 20110310 |
Complete genome sequence of Isosphaera pallida type strain (IS1B). | Standards in genomic sciences 20110304 |
Terrabacter carboxydivorans sp. nov., a carbon monoxide-oxidizing actinomycete. | International journal of systematic and evolutionary microbiology 20110301 |
Nocardioides hungaricus sp. nov., isolated from a drinking water supply system. | International journal of systematic and evolutionary microbiology 20110301 |
Phycicoccus ginsenosidimutans sp. nov., isolated from soil of a ginseng field. | International journal of systematic and evolutionary microbiology 20110301 |
Yuhushiella deserti gen. nov., sp. nov., a new member of the suborder Pseudonocardineae. | International journal of systematic and evolutionary microbiology 20110301 |
Paenibacillus puldeungensis sp. nov., isolated from a grassy sandbank. | International journal of systematic and evolutionary microbiology 20110301 |
Bacillus hunanensis sp. nov., a slightly halophilic bacterium isolated from non-saline forest soil. | Antonie van Leeuwenhoek 20110301 |
Horizontally acquired DAP pathway as a unit of self-regulation. | Journal of evolutionary biology 20110301 |
Analgesic effects of chemically synthesized NOD1 and NOD2 agonists in mice. | Innate immunity 20110201 |
Bacillus deserti sp. nov., a novel bacterium isolated from the desert of Xinjiang, China. | Antonie van Leeuwenhoek 20110201 |
A simple chromatographic route for the isolation of meso diaminopimelic acid. | Chirality 20110201 |
Pseudonocardia sichuanensis sp. nov., a novel endophytic actinomycete isolated from the root of Jatropha curcas L. | Antonie van Leeuwenhoek 20110201 |
Characteristics of cesium accumulation in the filamentous soil bacterium Streptomyces sp. K202. | Journal of environmental radioactivity 20110201 |
Thermasporomyces composti gen. nov., sp. nov., a thermophilic actinomycete isolated from compost. | International journal of systematic and evolutionary microbiology 20110101 |
Phycicoccus cremeus sp. nov., isolated from forest soil, and emended description of the genus Phycicoccus. | International journal of systematic and evolutionary microbiology 20110101 |
Jiangella muralis sp. nov., from an indoor environment. | International journal of systematic and evolutionary microbiology 20110101 |
Nocardioides caricicola sp. nov., an endophytic bacterium isolated from a halophyte, Carex scabrifolia Steud. | International journal of systematic and evolutionary microbiology 20110101 |
Geodermatophilus ruber sp. nov., isolated from rhizosphere soil of a medicinal plant. | International journal of systematic and evolutionary microbiology 20110101 |
Haloactinopolyspora alba gen. nov., sp. nov., a halophilic filamentous actinomycete isolated from a salt lake, with proposal of Jiangellaceae fam. nov. and Jiangellineae subord. nov. | International journal of systematic and evolutionary microbiology 20110101 |
Paenibacillus xylanisolvens sp. nov., a xylan-degrading bacterium from soil. | International journal of systematic and evolutionary microbiology 20110101 |
MicroRNA-92b regulates expression of the oligopeptide transporter PepT1 in intestinal epithelial cells. | American journal of physiology. Gastrointestinal and liver physiology 20110101 |
Crystallization and preliminary X-ray diffraction analysis of L,L-diaminopimelate aminotransferase (DapL) from Chlamydomonas reinhardtii. | Acta crystallographica. Section F, Structural biology and crystallization communications 20110101 |
Divergent responses to peptidoglycans derived from different E. coli serotypes influence inflammatory outcome in trout, Oncorhynchus mykiss, macrophages. | BMC genomics 20110101 |
Lack of an antibacterial response defect in Drosophila Toll-9 mutant. | PloS one 20110101 |
Novel genetic tools for diaminopimelic acid selection in virulence studies of Yersinia pestis. | PloS one 20110101 |
Fnr (EtrA) acts as a fine-tuning regulator of anaerobic metabolism in Shewanella oneidensis MR-1. | BMC microbiology 20110101 |
Global network analysis of drug tolerance, mode of action and virulence in methicillin-resistant S. aureus. | BMC systems biology 20110101 |
L,L-diaminopimelate aminotransferase from Chlamydomonas reinhardtii: a target for algaecide development. | PloS one 20110101 |
A second endolysin gene is fully embedded in-frame with the lysA gene of mycobacteriophage Ms6. | PloS one 20110101 |
Salmonella-induced mucosal lectin RegIIIβ kills competing gut microbiota. | PloS one 20110101 |
Nile red detection of bacterial hydrocarbons and ketones in a high-throughput format. | mBio 20110101 |
Alanine racemase mutants of Burkholderia pseudomallei and Burkholderia mallei and use of alanine racemase as a non-antibiotic-based selectable marker. | PloS one 20110101 |
Molecular Investigations of PenA-mediated β-lactam Resistance in Burkholderia pseudomallei. | Frontiers in microbiology 20110101 |
Environmental versatility promotes modularity in genome-scale metabolic networks. | BMC systems biology 20110101 |
Immunomodulatory mechanisms of lactobacilli. | Microbial cell factories 20110101 |
Serum antibodies protect against intraperitoneal challenge with enterotoxigenic Escherichia coli. | Journal of biomedicine & biotechnology 20110101 |
Lrp acts as both a positive and negative regulator for type 1 fimbriae production in Salmonella enterica serovar Typhimurium. | PloS one 20110101 |
Overview of stabilizing ligands for biocompatible quantum dot nanocrystals. | Sensors (Basel, Switzerland) 20110101 |
Inhibition of the Plasma-Membrane-Associated Serine Protease Cathepsin G by Mycobacterium tuberculosis Rv3364c Suppresses Caspase-1 and Pyroptosis in Macrophages. | Frontiers in microbiology 20110101 |
Genome-wide essential gene identification in Streptococcus sanguinis. | Scientific reports 20110101 |
Streptomyces tateyamensis sp. nov., Streptomyces marinus sp. nov. and Streptomyces haliclonae sp. nov., isolated from the marine sponge Haliclona sp. | International journal of systematic and evolutionary microbiology 20101201 |
Effect of graded levels of dietary betaine on ileal and total tract nutrient digestibilities and intestinal bacterial metabolites in piglets. | Journal of animal physiology and animal nutrition 20101201 |
Purification and biochemical characterization of Mur ligases from Staphylococcus aureus. | Biochimie 20101201 |
Production of recombinant Bombyx mori nucleopolyhedrovirus in silkworm by intrahaemocoelic injection with invasive diaminopimelate auxotrophic Escherichia coli containing BmNPV-Bacmid. | Biotechnology and applied biochemistry 20101201 |
Genome sequence of Kitasatospora setae NBRC 14216T: an evolutionary snapshot of the family Streptomycetaceae. | DNA research : an international journal for rapid publication of reports on genes and genomes 20101201 |
Pathogenic bacteria as vaccine vectors: teaching old bugs new tricks. | The Yale journal of biology and medicine 20101201 |
Identification of Streptomyces sp. KH29, which produces an antibiotic substance processing an inhibitory activity against multidrug-resistant Acinetobacter baumannii. | Journal of microbiology and biotechnology 20101201 |
Bacillus gaemokensis sp. nov., isolated from foreshore tidal flat sediment from the Yellow Sea. | Journal of microbiology (Seoul, Korea) 20101201 |
Diversity of innate immune recognition mechanism for bacterial polymeric meso-diaminopimelic acid-type peptidoglycan in insects. | The Journal of biological chemistry 20101022 |
Euzebya tangerina gen. nov., sp. nov., a deeply branching marine actinobacterium isolated from the sea cucumber Holothuria edulis, and proposal of Euzebyaceae fam. nov., Euzebyales ord. nov. and Nitriliruptoridae subclassis nov. | International journal of systematic and evolutionary microbiology 20101001 |
Nocardioides mesophilus sp. nov., isolated from soil. | International journal of systematic and evolutionary microbiology 20101001 |
Cohnella thailandensis sp. nov., a xylanolytic bacterium from Thai soil. | International journal of systematic and evolutionary microbiology 20101001 |
Camelimonas lactis gen. nov., sp. nov., isolated from the milk of camels. | International journal of systematic and evolutionary microbiology 20101001 |
Actinokineospora baliensis sp. nov., Actinokineospora cibodasensis sp. nov. and Actinokineospora cianjurensis sp. nov., isolated from soil and plant litter. | International journal of systematic and evolutionary microbiology 20101001 |
Nocardiopsis sinuspersici sp. nov., isolated from sandy rhizospheric soil. | International journal of systematic and evolutionary microbiology 20101001 |
Pseudonocardia babensis sp. nov., isolated from plant litter. | International journal of systematic and evolutionary microbiology 20101001 |
Angustibacter luteus gen. nov., sp. nov., isolated from subarctic forest soil. | International journal of systematic and evolutionary microbiology 20101001 |
Microlunatus parietis sp. nov., isolated from an indoor wall. | International journal of systematic and evolutionary microbiology 20101001 |
Paenibacillus sputi sp. nov., isolated from the sputum of a patient with pulmonary disease. | International journal of systematic and evolutionary microbiology 20101001 |
Hepatocytes express functional NOD1 and NOD2 receptors: a role for NOD1 in hepatocyte CC and CXC chemokine production. | Journal of hepatology 20101001 |
Nocardioides ginsengisegetis sp. nov., isolated from soil of a ginseng field. | Journal of microbiology (Seoul, Korea) 20101001 |
Complete genome sequence of Planctomyces limnophilus type strain (Mü 290). | Standards in genomic sciences 20100830 |
Enhanced induction of a histamine-forming enzyme, histidine decarboxylase, in mice primed with NOD1 or NOD2 ligand in response to various Toll-like receptor agonists. | Innate immunity 20100801 |
Complete genome sequence of Coraliomargarita akajimensis type strain (04OKA010-24). | Standards in genomic sciences 20100630 |
Cerasicoccus maritimus sp. nov. and Cerasicoccus frondis sp. nov., two peptidoglycan-less marine verrucomicrobial species, and description of Verrucomicrobia phyl. nov., nom. rev. | The Journal of general and applied microbiology 20100601 |
DNA adenine methylation is required to replicate both Vibrio cholerae chromosomes once per cell cycle. | PLoS genetics 20100501 |
Complete genome sequence of Geodermatophilus obscurus type strain (G-20). | Standards in genomic sciences 20100430 |
Structural basis for catalysis by the mono- and dimetalated forms of the dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase. | Journal of molecular biology 20100402 |
Actinoplanes toevensis sp. nov. and Actinoplanes tereljensis sp. nov., isolated from Mongolian soil. | International journal of systematic and evolutionary microbiology 20100401 |
Exploration of inhibitors for diaminopimelate aminotransferase. | Bioorganic & medicinal chemistry 20100315 |
Synthesis of N-succinyl-L,L-diaminopimelic acid mimetics via selective protection. | Protein and peptide letters 20100301 |
Extractability of polyhydroxyalkanoate synthesized by Bacillus flexus cultivated in organic and inorganic nutrient media. | Indian journal of microbiology 20100301 |
Complete genome sequence of Streptosporangium roseum type strain (NI 9100). | Standards in genomic sciences 20100227 |
Complete genome sequence of Veillonella parvula type strain (Te3). | Standards in genomic sciences 20100227 |
Substrate-mediated stabilization of a tetrameric drug target reveals Achilles heel in anthrax. | The Journal of biological chemistry 20100219 |
A novel economic method for high throughput production of recombinant baculovirus by infecting insect cells with Bacmid-containing diminopimelate-auxotrophic Escherichia coli. | Journal of biotechnology 20100101 |
Phylogenomics reveals subfamilies of fungal nonribosomal peptide synthetases and their evolutionary relationships. | BMC evolutionary biology 20100101 |
Virtual Screening of potential drug-like inhibitors against Lysine/DAP pathway of Mycobacterium tuberculosis. | BMC bioinformatics 20100101 |
Taurolidine antiadhesive properties on interaction with E. coli; its transformation in biological environment and interaction with bacteria cell wall. | PloS one 20100101 |
KiDoQ: using docking based energy scores to develop ligand based model for predicting antibacterials. | BMC bioinformatics 20100101 |
The Zymomonas mobilis regulator hfq contributes to tolerance against multiple lignocellulosic pretreatment inhibitors. | BMC microbiology 20100101 |
Massively parallel pyrosequencing-based transcriptome analyses of small brown planthopper (Laodelphax striatellus), a vector insect transmitting rice stripe virus (RSV). | BMC genomics 20100101 |
Carbon metabolism of enterobacterial human pathogens growing in epithelial colorectal adenocarcinoma (Caco-2) cells. | PloS one 20100101 |
Induction of Specific CD8 T Cells against Intracellular Bacteria by CD8 T-Cell-Oriented Immunization Approaches. | Journal of biomedicine & biotechnology 20100101 |
Mobile genetic element proliferation and gene inactivation impact over the genome structure and metabolic capabilities of Sodalis glossinidius, the secondary endosymbiont of tsetse flies. | BMC genomics 20100101 |
MyD88-dependent signaling contributes to host defense against ehrlichial infection. | PloS one 20100101 |
Eicosanoids in the innate immune response: TLR and non-TLR routes. | Mediators of inflammation 20100101 |
Systems approach to investigating host-pathogen interactions in infections with the biothreat agent Francisella. Constraints-based model of Francisella tularensis. | BMC systems biology 20100101 |
Prospects for the use of artificial chromosomes and minichromosome-like episomes in gene therapy. | Journal of biomedicine & biotechnology 20100101 |
The tricarboxylic acid cycle in Shewanella oneidensis is independent of Fur and RyhB control. | BMC microbiology 20100101 |
Methods for genetic manipulation of Burkholderia gladioli pathovar cocovenenans. | BMC research notes 20100101 |
Mutation detection with next-generation resequencing through a mediator genome. | PloS one 20100101 |
The aspartate-semialdehyde dehydrogenase of Edwardsiella ictaluri and its use as balanced-lethal system in fish vaccinology. | PloS one 20100101 |
Virgibacillus salinus sp. nov., a moderately halophilic bacterium from sediment of a saline lake. | International journal of systematic and evolutionary microbiology 20091201 |
Long-range activation of systemic immunity through peptidoglycan diffusion in Drosophila. | PLoS pathogens 20091201 |
Paenibacillus pini sp. nov., a cellulolytic bacterium isolated from the rhizosphere of pine tree. | Journal of microbiology (Seoul, Korea) 20091201 |
Virgibacillus xinjiangensis sp. nov., isolated from a Salt Lake of Xin-jiang Province in China. | Journal of microbiology (Seoul, Korea) 20091201 |
Scopulibacillus darangshiensis gen. nov., sp. nov., isolated from rock. | Journal of microbiology (Seoul, Korea) 20091201 |
Synthesis of conformationally constrained diaminodicarboxylic acid derivatives. | The Journal of organic chemistry 20091120 |
Inhibitors of bacterial N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE) and demonstration of in vitro antimicrobial activity. | Bioorganic & medicinal chemistry letters 20091115 |
Halobacillus hunanensis sp. nov., a moderately halophilic bacterium isolated from a subterranean brine. | Antonie van Leeuwenhoek 20091101 |
Description of Tessaracoccus profundi sp.nov., a deep-subsurface actinobacterium isolated from a Chesapeake impact crater drill core (940 m depth). | Antonie van Leeuwenhoek 20091101 |
Virgibacillus zhanjiangensis sp. nov., a marine bacterium isolated from sea water. | Antonie van Leeuwenhoek 20091101 |
Comparison of bacterial pellets and microbial markers for the estimation of the microbial nitrogen and amino acids flows from single flow continuous culture fermenters fed diets containing two-stage olive cake. | Journal of animal physiology and animal nutrition 20091001 |
Bhargavaea cecembensis gen. nov., sp. nov., isolated from the Chagos-Laccadive ridge system in the Indian Ocean. | International journal of systematic and evolutionary microbiology 20091001 |
Paenibacillus filicis sp. nov., isolated from the rhizosphere of the fern. | Journal of microbiology (Seoul, Korea) 20091001 |
Paenibacillus pinihumi sp. nov., a cellulolytic bacterium isolated from the rhizosphere of Pinus densiflora. | Journal of microbiology (Seoul, Korea) 20091001 |
Complete genome sequence of Capnocytophaga ochracea type strain (VPI 2845). | Standards in genomic sciences 20090929 |
Complete genome sequence of Eggerthella lenta type strain (IPP VPI 0255). | Standards in genomic sciences 20090929 |
Jiangella alba sp. nov., an endophytic actinomycete isolated from the stem of Maytenus austroyunnanensis. | International journal of systematic and evolutionary microbiology 20090901 |
Saccharopolyspora qijiaojingensis sp. nov., a halophilic actinomycete isolated from a salt lake. | International journal of systematic and evolutionary microbiology 20090901 |
Bacillus acidiproducens sp. nov., vineyard soil isolates that produce lactic acid. | International journal of systematic and evolutionary microbiology 20090901 |
Kineococcus rhizosphaerae sp. nov., isolated from rhizosphere soil. | International journal of systematic and evolutionary microbiology 20090901 |
Fodinibacter luteus gen. nov., sp. nov., an actinobacterium isolated from a salt mine. | International journal of systematic and evolutionary microbiology 20090901 |
Oceanobacillus kapialis sp. nov., from fermented shrimp paste in Thailand. | International journal of systematic and evolutionary microbiology 20090901 |
Helcobacillus massiliensis gen. nov., sp. nov., a novel representative of the family Dermabacteraceae isolated from a patient with a cutaneous discharge. | International journal of systematic and evolutionary microbiology 20090901 |
Structural features of single-stranded integron cassette attC sites and their role in strand selection. | PLoS genetics 20090901 |
A novel system for the launch of alphavirus RNA synthesis reveals a role for the Imd pathway in arthropod antiviral response. | PLoS pathogens 20090901 |
pH-dependent internalization of muramyl peptides from early endosomes enables Nod1 and Nod2 signaling. | The Journal of biological chemistry 20090828 |
Roles of TLR2, TLR4, NOD2, and NOD1 in pulp fibroblasts. | Journal of dental research 20090801 |
Complexation of uranium(VI) with peptidoglycan. | Dalton transactions (Cambridge, England : 2003) 20090721 |
Bacillus tianmuensis sp. nov., isolated from soil in Tianmu Mountain national natural reserve, Hangzhou, China. | FEMS microbiology letters 20090701 |
From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. | Microbiology (Reading, England) 20090601 |
NOD1 expression in the eye and functional contribution to IL-1beta-dependent ocular inflammation in mice. | Investigative ophthalmology & visual science 20090401 |
Regulation of Nod1 and Nod2 in first trimester trophoblast cells. | American journal of reproductive immunology (New York, N.Y. : 1989) 20090401 |
Structure of the diaminopimelate epimerase DapF from Mycobacterium tuberculosis. | Acta crystallographica. Section D, Biological crystallography 20090401 |
Actinomadura keratinilytica sp. nov., a keratin-degrading actinobacterium isolated from bovine manure compost. | International journal of systematic and evolutionary microbiology 20090401 |
Mutational analysis of the substrate specificity of Escherichia coli penicillin binding protein 4. | Biochemistry 20090331 |
Correlation of differential expression of silkworm antimicrobial Peptide genes with different amounts of rel family proteins and their gene transcriptional activity. | Bioscience, biotechnology, and biochemistry 20090323 |
Actinomycetes for marine drug discovery isolated from mangrove soils and plants in China. | Marine drugs 20090301 |
The dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase from Haemophilus influenzae contains two active-site histidine residues. | Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry 20090101 |
Complete genome sequence of the aerobic CO-oxidizing thermophile Thermomicrobium roseum. | PloS one 20090101 |
A new method for isolating host-independent variants of Bdellovibrio bacteriovorus using E. coli auxotrophs. | The open microbiology journal 20090101 |
PR3-ANCA in Wegener's granulomatosis prime human mononuclear cells for enhanced activation via TLRs and NOD1/2. | Diagnostic pathology 20090101 |
An improved method to knock out the asd gene of Salmonella enterica serovar Pullorum. | Journal of biomedicine & biotechnology 20090101 |
malT knockout mutation invokes a stringent type gene-expression profile in Actinobacillus pleuropneumoniae in bronchoalveolar fluid. | BMC microbiology 20090101 |
The Imd pathway is involved in antiviral immune responses in Drosophila. | PloS one 20090101 |
Flux-sum analysis: a metabolite-centric approach for understanding the metabolic network. | BMC systems biology 20090101 |
Mechanism of substrate recognition and PLP-induced conformational changes in LL-diaminopimelate aminotransferase from Arabidopsis thaliana. | Journal of molecular biology 20081231 |
Cell wall anchor structure of BcpA pili in Bacillus anthracis. | The Journal of biological chemistry 20081226 |
Analysis of cell wall constituents of biocide-resistant isolates from dental-unit water line biofilms. | Current microbiology 20081001 |
A polymer-type water-soluble peptidoglycan exhibited both Toll-like receptor 2- and NOD2-agonistic activities, resulting in synergistic activation of human monocytic cells. | Innate immunity 20081001 |
Reclassification of Streptomyces flavidofuscus as a synonym of Nocardiopsis dassonvillei subsp. dassonvillei. | International journal of systematic and evolutionary microbiology 20081001 |
Phycicoccus bigeumensis sp. nov., a mesophilic actinobacterium isolated from Bigeum Island, Korea. | International journal of systematic and evolutionary microbiology 20081001 |
Marihabitans asiaticum gen. nov., sp. nov., a meso-diaminopimelic acid-containing member of the family Intrasporangiaceae. | International journal of systematic and evolutionary microbiology 20081001 |
Kineococcus gynurae sp. nov., isolated from a Thai medicinal plant. | International journal of systematic and evolutionary microbiology 20081001 |
Bacillus alkalidiazotrophicus sp. nov., a diazotrophic, low salt-tolerant alkaliphile isolated from Mongolian soda soil. | International journal of systematic and evolutionary microbiology 20081001 |
Nocardioides salarius sp. nov., isolated from seawater enriched with zooplankton. | International journal of systematic and evolutionary microbiology 20080901 |
Haloactinospora alba gen. nov., sp. nov., a halophilic filamentous actinomycete of the family Nocardiopsaceae. | International journal of systematic and evolutionary microbiology 20080901 |
Paenibacillus tarimensis sp. nov., isolated from sand in Xinjiang, China. | International journal of systematic and evolutionary microbiology 20080901 |
Kribbella catacumbae sp. nov. and Kribbella sancticallisti sp. nov., isolated from whitish-grey patinas in the catacombs of St Callistus in Rome, Italy. | International journal of systematic and evolutionary microbiology 20080901 |
Halolactibacillus alkaliphilus sp. nov., a moderately alkaliphilic and halophilic bacterium isolated from a soda lake in Inner Mongolia, China, and emended description of the genus Halolactibacillus. | International journal of systematic and evolutionary microbiology 20080901 |
Autophagic control of listeria through intracellular innate immune recognition in drosophila. | Nature immunology 20080801 |
Proteomic investigation of amino acid catabolism in the indigenous gut anaerobe Fusobacterium varium. | Proteomics 20080701 |
Crystal structure of Drosophila PGRP-SD suggests binding to DAP-type but not lysine-type peptidoglycan. | Molecular immunology 20080501 |
Catalytic mechanism of l,l-diaminopimelic acid with diaminopimelate epimerase by molecular docking simulations. | Journal of molecular graphics & modelling 20080401 |
Molecular modelling and comparative structural account of aspartyl beta-semialdehyde dehydrogenase of Mycobacterium tuberculosis (H37Rv). | Journal of molecular modeling 20080401 |
Micromonospora krabiensis sp. nov., isolated from marine soil in Thailand. | The Journal of general and applied microbiology 20080401 |
Molecular cloning and functional characterization of porcine nucleotide-binding oligomerization domain-1 (NOD1) recognizing minimum agonists, meso-diaminopimelic acid and meso-lanthionine. | Molecular immunology 20080301 |
Characterization of Mycobacterium tuberculosis diaminopimelic acid epimerase: paired cysteine residues are crucial for racemization. | FEMS microbiology letters 20080301 |
Distinct TLR- and NLR-mediated transcriptional responses to an intracellular pathogen. | PLoS pathogens 20080101 |
Probing regulon of ArcA in Shewanella oneidensis MR-1 by integrated genomic analyses. | BMC genomics 20080101 |
Intracellular bacteriolysis triggers a massive apoptotic cell death in Shigella-infected epithelial cells. | Microbes and infection 20080101 |
Transcriptome analysis reveals response regulator SO2426-mediated gene expression in Shewanella oneidensis MR-1 under chromate challenge. | BMC genomics 20080101 |
Synthesis of diaminopimelic acid containing peptidoglycan fragments and tracheal cytotoxin (TCT) and investigation of their biological functions. | Chemistry (Weinheim an der Bergstrasse, Germany) 20080101 |
Toxicogenomic response of Pseudomonas aeruginosa to ortho-phenylphenol. | BMC genomics 20080101 |
Bacillus anthracis peptidoglycan stimulates an inflammatory response in monocytes through the p38 mitogen-activated protein kinase pathway. | PloS one 20080101 |
targetTB: a target identification pipeline for Mycobacterium tuberculosis through an interactome, reactome and genome-scale structural analysis. | BMC systems biology 20080101 |
Phylogenetic distribution and membrane topology of the LytR-CpsA-Psr protein family. | BMC genomics 20080101 |
Phage display-derived inhibitor of the essential cell wall biosynthesis enzyme MurF. | BMC biochemistry 20080101 |
Lapillicoccus jejuensis gen. nov., sp. nov., a novel actinobacterium of the family Intrasporangiaceae, isolated from stone. | International journal of systematic and evolutionary microbiology 20071201 |
Knoellia aerolata sp. nov., isolated from an air sample in Korea. | International journal of systematic and evolutionary microbiology 20071201 |
Pelagicoccus croceus sp. nov., a novel marine member of the family Puniceicoccaceae within the phylum 'Verrucomicrobia' isolated from seagrass. | International journal of systematic and evolutionary microbiology 20071201 |
Nocardioides marinisabuli sp. nov., a novel actinobacterium isolated from beach sand. | International journal of systematic and evolutionary microbiology 20071201 |
A straightforward stereoselective synthesis of meso-, (S,S)- and (R,R)-2,6-diaminopimelic acids from cis-1,4-diacetoxycyclohept-2-ene. | Bioorganic & medicinal chemistry letters 20071101 |
Stereoselective syntheses of 4-oxa diaminopimelic acid and its protected derivatives via aziridine ring opening. | Organic letters 20071011 |
A comparison of immunogenicity and protective immunity against experimental plague by intranasal and/or combined with oral immunization of mice with attenuated Salmonella serovar Typhimurium expressing secreted Yersinia pestis F1 and V antigen. | FEMS immunology and medical microbiology 20071001 |
Catenulispora rubra sp. nov., an acidophilic actinomycete isolated from forest soil. | International journal of systematic and evolutionary microbiology 20071001 |
Rubritalea spongiae sp. nov. and Rubritalea tangerina sp. nov., two carotenoid- and squalene-producing marine bacteria of the family Verrucomicrobiaceae within the phylum 'Verrucomicrobia', isolated from marine animals. | International journal of systematic and evolutionary microbiology 20071001 |
Salsuginibacillus kocurii gen. nov., sp. nov., a moderately halophilic bacterium from soda-lake sediment. | International journal of systematic and evolutionary microbiology 20071001 |
Reclassification of Marinococcus albus Hao et al. 1985 as Salimicrobium album gen. nov., comb. nov. and Bacillus halophilus Ventosa et al. 1990 as Salimicrobium halophilum comb. nov., and description of Salimicrobium luteum sp. nov. | International journal of systematic and evolutionary microbiology 20071001 |
Nod1 and Nod2 induce CCL5/RANTES through the NF-kappaB pathway. | European journal of immunology 20070901 |
Kribbella aluminosa sp. nov., isolated from a medieval alum slate mine. | International journal of systematic and evolutionary microbiology 20070901 |
Modestobacter versicolor sp. nov., an actinobacterium from biological soil crusts that produces melanins under oligotrophy, with emended descriptions of the genus Modestobacter and Modestobacter multiseptatus Mevs et al. 2000. | International journal of systematic and evolutionary microbiology 20070901 |
Halobacillus campisalis sp. nov., containing meso-diaminopimelic acid in the cell-wall peptidoglycan, and emended description of the genus Halobacillus. | International journal of systematic and evolutionary microbiology 20070901 |
Classification of 'Sarraceniospora aurea' Furihata et al. 1989 as Actinocorallia aurea sp. nov. | International journal of systematic and evolutionary microbiology 20070901 |
Cerasicoccus arenae gen. nov., sp. nov., a carotenoid-producing marine representative of the family Puniceicoccaceae within the phylum 'Verrucomicrobia', isolated from marine sand. | International journal of systematic and evolutionary microbiology 20070901 |
Bacillus chagannorensis sp. nov., a moderate halophile from a soda lake in Inner Mongolia, China. | International journal of systematic and evolutionary microbiology 20070901 |
Aestuariimicrobium kwangyangense gen. nov., sp. nov., an LL-diaminopimelic acid-containing bacterium isolated from tidal flat sediment. | International journal of systematic and evolutionary microbiology 20070901 |
Humihabitans oryzae gen. nov., sp. nov. | International journal of systematic and evolutionary microbiology 20070901 |
Crystal structure of LL-diaminopimelate aminotransferase from Arabidopsis thaliana: a recently discovered enzyme in the biosynthesis of L-lysine by plants and Chlamydia. | Journal of molecular biology 20070817 |
Elution behavior of diaminopimelic acid and related diamino acids using the advanced Marfey's method. | Journal of chromatography. A 20070810 |
Crystal structure of the Bacillus subtilis penicillin-binding protein 4a, and its complex with a peptidoglycan mimetic peptide. | Journal of molecular biology 20070810 |
Reliable and sensitive analysis of amino acids in the peptidoglycan of actinomycetes using the advanced Marfey's method. | Journal of microbiological methods 20070801 |
Sporosarcina koreensis sp. nov. and Sporosarcina soli sp. nov., isolated from soil in Korea. | International journal of systematic and evolutionary microbiology 20070801 |
Pelagicoccus mobilis gen. nov., sp. nov., Pelagicoccus albus sp. nov. and Pelagicoccus litoralis sp. nov., three novel members of subdivision 4 within the phylum 'Verrucomicrobia', isolated from seawater by in situ cultivation. | International journal of systematic and evolutionary microbiology 20070701 |
Marmoricola aequoreus sp. nov., a novel actinobacterium isolated from marine sediment. | International journal of systematic and evolutionary microbiology 20070701 |
Piscibacillus salipiscarius gen. nov., sp. nov., a moderately halophilic bacterium from fermented fish (pla-ra) in Thailand. | International journal of systematic and evolutionary microbiology 20070701 |
Rubritalea squalenifaciens sp. nov., a squalene-producing marine bacterium belonging to subdivision 1 of the phylum 'Verrucomicrobia'. | International journal of systematic and evolutionary microbiology 20070701 |
Specificity of L,D-transpeptidases from gram-positive bacteria producing different peptidoglycan chemotypes. | The Journal of biological chemistry 20070504 |
Coraliomargarita akajimensis gen. nov., sp. nov., a novel member of the phylum 'Verrucomicrobia' isolated from seawater in Japan. | International journal of systematic and evolutionary microbiology 20070501 |
Desulfurispora thermophila gen. nov., sp. nov., a thermophilic, spore-forming sulfate-reducer isolated from a sulfidogenic fluidized-bed reactor. | International journal of systematic and evolutionary microbiology 20070501 |
A role of lipophilic peptidoglycan-related molecules in induction of Nod1-mediated immune responses. | The Journal of biological chemistry 20070420 |
Another brick in the wall. | Trends in microbiology 20070401 |
A GC-FID method for analysis of lysinoalanine. | Molecular nutrition & food research 20070401 |
A novel highly boron tolerant bacterium, Bacillus boroniphilus sp. nov., isolated from soil, that requires boron for its growth. | Extremophiles : life under extreme conditions 20070301 |
Effects of a dietary organic acid mixture and of dietary fibre levels on ileal and faecal nutrient apparent digestibility, bacterial nitrogen flow, microbial metabolite concentrations and rate of passage in the digestive tract of pigs. | Animal : an international journal of animal bioscience 20070301 |
RICK/RIP2 mediates innate immune responses induced through Nod1 and Nod2 but not TLRs. | Journal of immunology (Baltimore, Md. : 1950) 20070215 |
Aeromicrobium tamlense sp. nov., isolated from dried seaweed. | International journal of systematic and evolutionary microbiology 20070201 |
Lentibacillus kapialis sp. nov., from fermented shrimp paste in Thailand. | International journal of systematic and evolutionary microbiology 20070201 |
Mutational analysis of peptidoglycan amidase MepA. | Biochemistry 20070109 |
Marinobacterium halophilum sp. nov., a marine bacterium isolated from the Yellow Sea. | International journal of systematic and evolutionary microbiology 20070101 |
On the origin and evolution of biosynthetic pathways: integrating microarray data with structure and organization of the Common Pathway genes. | BMC bioinformatics 20070101 |
The primordial metabolism: an ancestral interconnection between leucine, arginine, and lysine biosynthesis. | BMC evolutionary biology 20070101 |
Genetic characterization of psp encoding the DING protein in Pseudomonas fluorescens SBW25. | BMC microbiology 20070101 |
Differential effect of auxotrophies on the release of macromolecules by Salmonella enterica vaccine strains. | FEMS microbiology letters 20061201 |
PGRP-SB1: an N-acetylmuramoyl L-alanine amidase with antibacterial activity. | Biochemical and biophysical research communications 20061201 |
Use of a codon alteration strategy in a novel approach to cloning the Mycobacterium tuberculosis diaminopimelic acid epimerase. | FEMS microbiology letters 20060901 |
Meso-diaminopimelic acid and meso-lanthionine, amino acids specific to bacterial peptidoglycans, activate human epithelial cells through NOD1. | Journal of immunology (Baltimore, Md. : 1950) 20060801 |
Lentibacillus halophilus sp. nov., from fish sauce in Thailand. | International journal of systematic and evolutionary microbiology 20060801 |
Brevibacterium samyangense sp. nov., an actinomycete isolated from a beach sediment. | International journal of systematic and evolutionary microbiology 20060801 |
A new genus of the family Micromonosporaceae, Polymorphospora gen. nov., with description of Polymorphospora rubra sp. nov. | International journal of systematic and evolutionary microbiology 20060801 |
Brooklawnia cerclae gen. nov., sp. nov., a propionate-forming bacterium isolated from chlorosolvent-contaminated groundwater. | International journal of systematic and evolutionary microbiology 20060801 |
PGRP-LC and PGRP-LE have essential yet distinct functions in the drosophila immune response to monomeric DAP-type peptidoglycan. | Nature immunology 20060701 |
TOLLing away in Brazil. | Nature immunology 20060701 |
The MurE synthetase from Thermotoga maritima is endowed with an unusual D-lysine adding activity. | The Journal of biological chemistry 20060609 |
Kribbella karoonensis sp. nov. and Kribbella swartbergensis sp. nov., isolated from soil from the Western Cape, South Africa. | International journal of systematic and evolutionary microbiology 20060501 |
[Construction and characterization of delta crp delta asd mutant host-vector balanced lethal system of Salmonella choleraesuis C500 strain]. | Sheng wu gong cheng xue bao = Chinese journal of biotechnology 20060501 |
A synthetic peptidoglycan fragment as a competitive inhibitor of the melanization cascade. | The Journal of biological chemistry 20060324 |
Structural basis for preferential recognition of diaminopimelic acid-type peptidoglycan by a subset of peptidoglycan recognition proteins. | The Journal of biological chemistry 20060324 |
Structure of tracheal cytotoxin in complex with a heterodimeric pattern-recognition receptor. | Science (New York, N.Y.) 20060324 |
Kinetic and spectroscopic characterization of the E134A- and E134D-altered dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase from Haemophilus influenzae. | Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry 20060301 |
Diptericin expression in bacteria infected Drosophila mbn-2 cells - effect of infection dose and phagocytosis. | Insect molecular biology 20060201 |
An LL-diaminopimelate aminotransferase defines a novel variant of the lysine biosynthesis pathway in plants. | Plant physiology 20060101 |
Bacillus koreensis sp. nov., a spore-forming bacterium, isolated from the rhizosphere of willow roots in Korea. | International journal of systematic and evolutionary microbiology 20060101 |
Practical thin layer chromatography techniques for diaminopimelic acid and whole cell sugar analyses in the classification of environmental actinomycetes. | Journal of basic microbiology 20060101 |
Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection. | Molecular systems biology 20060101 |
Rooting the tree of life by transition analyses. | Biology direct 20060101 |
The peptidoglycan recognition proteins (PGRPs). | Genome biology 20060101 |
Enhancement of TLR-mediated innate immune responses by peptidoglycans through NOD signaling. | Current pharmaceutical design 20060101 |
The stereoselective synthesis of aziridine analogues of diaminopimelic acid (DAP) and their interaction with dap epimerase. | Organic & biomolecular chemistry 20051221 |
Selective recognition of synthetic lysine and meso-diaminopimelic acid-type peptidoglycan fragments by human peptidoglycan recognition proteins I{alpha} and S. | The Journal of biological chemistry 20051104 |
On-line sample preconcentration with chemical derivatization of bacterial biomarkers by capillary electrophoresis: a dual strategy for integrating sample pretreatment with chemical analysis. | Electrophoresis 20051101 |
Synthesis and proinflammatory properties of muramyl tripeptides containing lysine and diaminopimelic acid moieties. | Chembiochem : a European journal of chemical biology 20051101 |
NOD2 and toll-like receptors are nonredundant recognition systems of Mycobacterium tuberculosis. | PLoS pathogens 20051101 |
Eight new species of the genus Micromonospora, Micromonospora citrea sp. nov., Micromonospora echinaurantiaca sp. nov., Micromonospora echinofusca sp. nov. Micromonospora fulviviridis sp. nov., Micromonospora inyonensis sp. nov., Micromonospora peucetia sp. nov., Micromonospora sagamiensis sp. nov., and Micromonospora viridifaciens sp. nov. | Systematic and applied microbiology 20050601 |
Chemically synthesized pathogen-associated molecular patterns increase the expression of peptidoglycan recognition proteins via toll-like receptors, NOD1 and NOD2 in human oral epithelial cells. | Cellular microbiology 20050501 |
Pontibacillus marinus sp. nov., a moderately halophilic bacterium from a solar saltern, and emended description of the genus Pontibacillus. | International journal of systematic and evolutionary microbiology 20050501 |
Bacillus arsenicus sp. nov., an arsenic-resistant bacterium isolated from a siderite concretion in West Bengal, India. | International journal of systematic and evolutionary microbiology 20050501 |
NOD1 variation, immunoglobulin E and asthma. | Human molecular genetics 20050401 |
Use of odd and branched-chain fatty acids in rumen contents and milk as a potential microbial marker. | Journal of dairy science 20050301 |
Biosynthesis of lysine in plants: evidence for a variant of the known bacterial pathways. | Biochimica et biophysica acta 20050118 |
Linking enzyme sequence to function using Conserved Property Difference Locator to identify and annotate positions likely to control specific functionality. | BMC bioinformatics 20050101 |
Peptidoglycan molecular requirements allowing detection by the Drosophila immune deficiency pathway. | Journal of immunology (Baltimore, Md. : 1950) 20041215 |
An efficient RCM-based synthesis of orthogonally protected meso-DAP and FK565. | The Journal of organic chemistry 20041210 |
Peptidoglycan recognition protein (PGRP)-LE and PGRP-LC act synergistically in Drosophila immunity. | The EMBO journal 20041124 |
Janibacter melonis sp. nov., isolated from abnormally spoiled oriental melon in Korea. | International journal of systematic and evolutionary microbiology 20041101 |
Planotetraspora silvatica sp. nov. and emended description of the genus Planotetraspora. | International journal of systematic and evolutionary microbiology 20041101 |
Brevibacterium celere sp. nov., isolated from degraded thallus of a brown alga. | International journal of systematic and evolutionary microbiology 20041101 |
Bacillus vietnamensis sp. nov., a moderately halotolerant, aerobic, endospore-forming bacterium isolated from Vietnamese fish sauce. | International journal of systematic and evolutionary microbiology 20041101 |
Cloning, characterization and heterologous expression of the aspartokinase and aspartate semialdehyde dehydrogenase genes of cephamycin C-producer Streptomyces clavuligerus. | Research in microbiology 20040901 |
A Drosophila pattern recognition receptor contains a peptidoglycan docking groove and unusual L,D-carboxypeptidase activity. | PLoS biology 20040901 |
Brevibacterium picturae sp. nov., isolated from a damaged mural painting at the Saint-Catherine chapel (Castle Herberstein, Austria). | International journal of systematic and evolutionary microbiology 20040901 |
Nocardiopsis salina sp. nov., a novel halophilic actinomycete isolated from saline soil in China. | International journal of systematic and evolutionary microbiology 20040901 |
The role of substrate-binding groups in the mechanism of aspartate-beta-semialdehyde dehydrogenase. | Acta crystallographica. Section D, Biological crystallography 20040801 |
Inter-relationship of microbial activity, digestion and gut health in the rabbit: effect of substituting fibre by starch in diets having a high proportion of rapidly fermentable polysaccharides. | The British journal of nutrition 20040701 |
Expression from the Escherichia coli dapA promoter is regulated by intracellular levels of diaminopimelic acid. | FEMS microbiology letters 20040601 |
[Chemical structures of bacterial peptidoglycan and immunomodulation in mammals]. | Tanpakushitsu kakusan koso. Protein, nucleic acid, enzyme 20040601 |
Estimation of the proportion of bacterial nitrogen in canine feces using diaminopimelic acid as an internal bacterial marker. | Journal of animal science 20040601 |
Occurrence and degradation of peptidoglycan in aquatic environments. | FEMS microbiology ecology 20031201 |
Substrate specificity, metal binding properties, and spectroscopic characterization of the DapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase from Haemophilus influenzae. | Biochemistry 20030916 |
Identification and characterization of the last two unknown genes, dapC and dapF, in the succinylase branch of the L-lysine biosynthesis of Corynebacterium glutamicum. | Journal of biotechnology 20030904 |
Streptomonospora alba sp. nov., a novel halophilic actinomycete, and emended description of the genus Streptomonospora Cui et al. 2001. | International journal of systematic and evolutionary microbiology 20030901 |
Extragenic suppression of the requirement for diaminopimelate in diaminopimelate auxotrophs of Mycobacterium smegmatis. | FEMS microbiology letters 20030808 |
Carbohydrates digestibility and faecal nitrogen excretion in rats fed raw or germinated faba bean (Vicia faba)- and chickpea (Cicer arietinum)-based diets. | The British journal of nutrition 20030801 |
An essential role for NOD1 in host recognition of bacterial peptidoglycan containing diaminopimelic acid. | Nature immunology 20030701 |
Intracellular debugging. | Nature immunology 20030701 |
A spin labelling study of immunomodulating peptidoglycan monomer and adamantyltripeptides entrapped into liposomes. | Biochimica et biophysica acta 20030401 |
Marinobacter lutaoensis sp. nov., a thermotolerant marine bacterium isolated from a coastal hot spring in Lutao, Taiwan. | Canadian journal of microbiology 20030401 |
Inhibitors of lysine biosynthesis as antibacterial agents. | Mini reviews in medicinal chemistry 20030301 |
Conexibacter woesei gen. nov., sp. nov., a novel representative of a deep evolutionary line of descent within the class Actinobacteria. | International journal of systematic and evolutionary microbiology 20030301 |
Determination of diaminopimelic acid in rat feces by high-performance liquid chromatography using the Pico Tag method. | Journal of chromatography. B, Analytical technologies in the biomedical and life sciences 20030125 |
Investigation of salicylaldehyde-5-sulfonate as a precolumn derivatizing agent for the determination of n-alkane diamines, lysine, diaminopimelic acid, and isoniazid by capillary zone electrophoresis. | Journal of pharmaceutical and biomedical analysis 20030101 |
Molecular cloning and characterization of Escherichia coli K12 ygjG gene. | BMC microbiology 20030101 |
[The structure of peptidoglycan from Lysobacter sp.--a producer of extracellular bacteriolytic enzymes]. | Mikrobiologiia 20030101 |
Streptacidiphilus gen. nov., acidophilic actinomycetes with wall chemotype I and emendation of the family Streptomycetaceae (Waksman and Henrici (1943)AL) emend. Rainey et al. 1997. | Antonie van Leeuwenhoek 20030101 |
Isolation and characterization of Streptomyces sp KH-614 producing anti-VRE (vancomycin-resistant enterococci) antibiotics. | The Journal of general and applied microbiology 20021201 |
Molecular evolution of the lysine biosynthetic pathways. | Journal of molecular evolution 20021001 |
Tetrasphaera elongata sp. nov., a polyphosphate-accumulating bacterium isolated from activated sludge. | International journal of systematic and evolutionary microbiology 20020501 |
Paenibacillus chinjuensis sp. nov., a novel exopolysaccharide-producing bacterium. | International journal of systematic and evolutionary microbiology 20020301 |
Classification of three airborne bacteria and proposal of Hymenobacter aerophilus sp. nov. | International journal of systematic and evolutionary microbiology 20020301 |
Saccharomonospora halophila sp. nov., a novel halophilic actinomycete isolated from marsh soil in Kuwait. | International journal of systematic and evolutionary microbiology 20020301 |
Crystal structure of inositol 1-phosphate synthase from Mycobacterium tuberculosis, a key enzyme in phosphatidylinositol synthesis. | Structure (London, England : 1993) 20020301 |
Conjugate addition of radicals generated from diacyloxyiodobenzenes to dehydroamino acid derivatives; a synthesis of diaminopimelic acid analogues. | Chemical communications (Cambridge, England) 20020207 |
The cell wall of Micromonospora purpurea contains a high conductance channel. | Archives of microbiology 20020201 |
Construction of a trivalent candidate vaccine against Shigella species with DNA recombination. | Science in China. Series C, Life sciences 20020201 |
Knoellia sinensis gen. nov., sp. nov. and Knoellia subterranea sp. nov., two novel actinobacteria isolated from a cave. | International journal of systematic and evolutionary microbiology 20020101 |
Description of two novel species of the genus Kitasatospora Omura et al. 1982, Kitasatospora cineracea sp. nov. and Kitasatospora niigatensis sp. nov. | International journal of systematic and evolutionary microbiology 20010901 |
Identification of a cell wall channel of Streptomyces griseus: the channel contains a binding site for streptomycin. | Molecular microbiology 20010801 |
Synthesis of enantiomerically and diastereomerically pure 2(S)-amino-6(R)-hydroxy-1,7-heptanedioic acid dimethyl ester hydrochloride from cycloheptadiene. | The Journal of organic chemistry 20010713 |
General stereoselective synthesis of chemically differentiated alpha-diamino acids: synthesis of 2,6-diaminopimelic and 2,7-diaminosuberic acids. | The Journal of organic chemistry 20010713 |
Chromatographic method for diaminopimelic acid detection in calcareous rocks. Presence of a bacterial biomarker in stromatolites. | Journal of chromatography. A 20010713 |
[Study on the application of quantitative analysis of cell-wall amino acids in actinomycetes classification]. | Wei sheng wu xue bao = Acta microbiologica Sinica 20010601 |
A high-performance liquid chromatography method for the detection of diaminopimelic acid in urine. | Analytical biochemistry 20010401 |
Inhibitors of dihydrodipicolinate reductase, a key enzyme of the diaminopimelate pathway of Mycobacterium tuberculosis. | Biochimica et biophysica acta 20010209 |
Determination of diamino acids in peptidoglycans from anaerobic bacteria. | Amino acids 20010101 |
Bacterial N-succinyl-L-diaminopimelic acid desuccinylase. Purification, partial characterization, and substrate specificity. | The Journal of biological chemistry 19880205 |