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3-methylcytidine

CAS No.:
2140-64-9
Catalog Number:
AG00BGGJ
Molecular Formula:
Molecular Weight:
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Product Description
Catalog Number:
AG00BGGJ
Chemical Name:
3-methylcytidine
CAS Number:
2140-64-9
MDL Number:
MFCD07778656
IUPAC Name:
1-[(2R,3R,4S,5R)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]-4-imino-3-methylpyrimidin-2-one
InChI:
InChI=1S/C10H15N3O5/c1-12-6(11)2-3-13(10(12)17)9-8(16)7(15)5(4-14)18-9/h2-3,5,7-9,11,14-16H,4H2,1H3/t5-,7-,8-,9-/m1/s1
InChI Key:
RDPUKVRQKWBSPK-ZOQUXTDFSA-N
Properties
Complexity:
399  
Compound Is Canonicalized:
Yes
Covalently-Bonded Unit Count:
1  
Defined Atom Stereocenter Count:
4  
Defined Bond Stereocenter Count:
0
Exact Mass:
257.101g/mol
Formal Charge:
0
Heavy Atom Count:
18  
Hydrogen Bond Acceptor Count:
6  
Hydrogen Bond Donor Count:
4  
Isotope Atom Count:
0
Molecular Weight:
257.246g/mol
Monoisotopic Mass:
257.101g/mol
Rotatable Bond Count:
2  
Topological Polar Surface Area:
117A^2
Undefined Atom Stereocenter Count:
0
Undefined Bond Stereocenter Count:
0
XLogP3:
-1.7  
Literature
Title Journal
The state-of-the-art determination of urinary nucleosides using chromatographic techniques 'hyphenated' with advanced bioinformatic methods. Analytical and bioanalytical chemistry 20111001
Analysis of urinary nucleosides as potential tumor markers in human breast cancer by high performance liquid chromatography/electrospray ionization tandem mass spectrometry. Clinica chimica acta; international journal of clinical chemistry 20110918
A domain of the actin binding protein Abp140 is the yeast methyltransferase responsible for 3-methylcytidine modification in the tRNA anti-codon loop. RNA (New York, N.Y.) 20110601
Actin-binding protein ABP140 is a methyltransferase for 3-methylcytidine at position 32 of tRNAs in Saccharomyces cerevisiae. RNA (New York, N.Y.) 20110601
Methylation stabilizes the imino tautomer of dAMP and amino tautomer of dCMP in solution. The journal of physical chemistry. B 20110519
A quantitative systems approach reveals dynamic control of tRNA modifications during cellular stress. PLoS genetics 20101201
Transfer RNA modifications and genes for modifying enzymes in Arabidopsis thaliana. BMC plant biology 20100101
Analysis of urinary nucleosides as helper tumor markers in hepatocellular carcinoma diagnosis. Rapid communications in mass spectrometry : RCM 20090601
Prediction of breast cancer by profiling of urinary RNA metabolites using Support Vector Machine-based feature selection. BMC cancer 20090101
Relevance of a combined UV and single mass spectrometry detection for the determination of tenofovir in human plasma by HPLC in therapeutic drug monitoring. Journal of chromatography. B, Analytical technologies in the biomedical and life sciences 20070701
Collision-induced dissociation of cytidine and its derivatives. Journal of mass spectrometry : JMS 20070101
Metabolic signature of breast cancer cell line MCF-7: profiling of modified nucleosides via LC-IT MS coupling. BMC biochemistry 20070101
The selectivity and inhibition of AlkB. The Journal of biological chemistry 20030321
Properties