Chorismic acid from Enterobacter aerogenes
| Title | Journal |
|---|---|
| Biosynthesis of fomannoxin in the root rotting pathogen Heterobasidion occidentale. | Phytochemistry 20121201 |
| Molecular dynamics simulation of the last step of a catalytic cycle: product release from the active site of the enzyme chorismate mutase from Mycobacterium tuberculosis. | Protein science : a publication of the Protein Society 20121101 |
| A reporter system that discriminates EF-hand-sensor motifs from signal-modulators at the single-motif level. | FEBS letters 20120921 |
| C-N bond formation under Cu-catalysis: synthesis and in vitro evaluation of N-aryl substituted thieno[2,3-d]pyrimidin-4(3H)-ones against chorismate mutase. | Bioorganic & medicinal chemistry 20120901 |
| Implications of binding mode and active site flexibility for inhibitor potency against the salicylate synthase from Mycobacterium tuberculosis. | Biochemistry 20120619 |
| Structural analysis of a 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase with an N-terminal chorismate mutase-like regulatory domain. | Protein science : a publication of the Protein Society 20120601 |
| Regulators of floral fragrance production and their target genes in petunia are not exclusively active in the epidermal cells of petals. | Journal of experimental botany 20120501 |
| The Ustilago maydis effector Pep1 suppresses plant immunity by inhibition of host peroxidase activity. | PLoS pathogens 20120501 |
| Olefin isomerization regiochemistries during tandem action of BacA and BacB on prephenate in bacilysin biosynthesis. | Biochemistry 20120417 |
| Expression of a bacterial feedback-insensitive 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase of the shikimate pathway in Arabidopsis elucidates potential metabolic bottlenecks between primary and secondary metabolism. | The New phytologist 20120401 |
| Understanding the different activities of highly promiscuous MbtI by computational methods. | Physical chemistry chemical physics : PCCP 20120314 |
| AlCl3 induced (hetero)arylation of 2,3-dichloroquinoxaline: a one-pot synthesis of mono/disubstituted quinoxalines as potential antitubercular agents. | Bioorganic & medicinal chemistry 20120301 |
| Indifferent, affectionate, or deceitful: lifestyles and secretomes of fungi. | PLoS pathogens 20120301 |
| Quantitative Proteomics of Intracellular Campylobacter jejuni Reveals Metabolic Reprogramming. | PLoS pathogens 20120301 |
| Determinants of reactivity and selectivity in soluble epoxide hydrolase from quantum mechanics/molecular mechanics modeling. | Biochemistry 20120227 |
| Rational approaches to improving selectivity in drug design. | Journal of medicinal chemistry 20120223 |
| The β1 domain of protein G can replace the chorismate mutase domain of the T-protein. | FEBS letters 20120217 |
| Characterization of central carbon metabolism of Streptococcus pneumoniae by isotopologue profiling. | The Journal of biological chemistry 20120203 |
| Resolving phenylalanine metabolism sheds light on natural synthesis of penicillin G in Penicillium chrysogenum. | Eukaryotic cell 20120201 |
| Genome-wide transcriptional profiling of appressorium development by the rice blast fungus Magnaporthe oryzae. | PLoS pathogens 20120201 |
| Cu-mediated N-arylation of 1,2,3-triazin-4-ones: synthesis of fused triazinone derivatives as potential inhibitors of chorismate mutase. | Bioorganic & medicinal chemistry letters 20120115 |
| Aminobenzoates as building blocks for natural product assembly lines. | Natural product reports 20120101 |
| Enumerating metabolic pathways for the production of heterologous target chemicals in chassis organisms. | BMC systems biology 20120101 |
| Insight into the transmission biology and species-specific functional capabilities of tsetse (Diptera: glossinidae) obligate symbiont Wigglesworthia. | mBio 20120101 |
| One-step of tryptophan attenuator inactivation and promoter swapping to improve the production of L-tryptophan in Escherichia coli. | Microbial cell factories 20120101 |
| Carbinolamine formation and dehydration in a DNA repair enzyme active site. | PloS one 20120101 |
| A role for nonsense-mediated mRNA decay in plants: pathogen responses are induced in Arabidopsis thaliana NMD mutants. | PloS one 20120101 |
| A catalytic mechanism for cysteine N-terminal nucleophile hydrolases, as revealed by free energy simulations. | PloS one 20120101 |
| Structures of Helicobacter pylori shikimate kinase reveal a selective inhibitor-induced-fit mechanism. | PloS one 20120101 |
| A programmable Escherichia coli consortium via tunable symbiosis. | PloS one 20120101 |
| The Acinetobacter baumannii entA gene located outside the acinetobactin cluster is critical for siderophore production, iron acquisition and virulence. | PloS one 20120101 |
| The mode of sucrose degradation in potato tubers determines the fate of assimilate utilization. | Frontiers in plant science 20120101 |
| Genome-Wide Characterization of ISR Induced in Arabidopsis thaliana by Trichoderma hamatum T382 Against Botrytis cinerea Infection. | Frontiers in plant science 20120101 |
| Identification of functional differences in metabolic networks using comparative genomics and constraint-based models. | PloS one 20120101 |
| SOP for pathway inference in Integrated Microbial Genomes (IMG). | Standards in genomic sciences 20111231 |
| Metabolic engineering of Escherichia coli for improving L-3,4-dihydroxyphenylalanine (L-DOPA) synthesis from glucose. | Journal of industrial microbiology & biotechnology 20111101 |
| The Proteome Folding Project: proteome-scale prediction of structure and function. | Genome research 20111101 |
| A proteomic analysis of the chromoplasts isolated from sweet orange fruits [Citrus sinensis (L.) Osbeck]. | Journal of experimental botany 20111101 |
| A Pd-mediated new strategy to functionalized 2-aminochromenes: their in vitro evaluation as potential anti tuberculosis agents. | Bioorganic & medicinal chemistry letters 20111101 |
| Serratia symbiotica from the aphid Cinara cedri: a missing link from facultative to obligate insect endosymbiont. | PLoS genetics 20111101 |
| Genetic interaction maps in Escherichia coli reveal functional crosstalk among cell envelope biogenesis pathways. | PLoS genetics 20111101 |
| An N-terminal protein degradation tag enables robust selection of highly active enzymes. | Biochemistry 20111011 |
| Using substrate analogues to probe the kinetic mechanism and active site of Escherichia coli MenD. | Biochemistry 20111011 |
| Metabolic priming by a secreted fungal effector. | Nature 20111005 |
| Search for live attenuated vaccine candidate against edwardsiellosis by mutating virulence-related genes of fish pathogen Edwardsiella tarda. | Letters in applied microbiology 20111001 |
| Computational modeling of allosteric communication reveals organizing principles of mutation-induced signaling in ABL and EGFR kinases. | PLoS computational biology 20111001 |
| Pericyclic reactions catalyzed by chorismate-utilizing enzymes. | Biochemistry 20110906 |
| Crystal structures and putative interface of Saccharomyces cerevisiae mitochondrial matrix proteins Mmf1 and Mam33. | Journal of structural biology 20110901 |
| Binding leverage as a molecular basis for allosteric regulation. | PLoS computational biology 20110901 |
| Structural view of the regulatory subunit of aspartate kinase from Mycobacterium tuberculosis. | Protein & cell 20110901 |
| pH Dependence of catalysis by Pseudomonas aeruginosa isochorismate-pyruvate lyase: implications for transition state stabilization and the role of lysine 42. | Biochemistry 20110823 |
| Diversity-oriented production of metabolites derived from chorismate and their use in organic synthesis. | Angewandte Chemie (International ed. in English) 20110816 |
| Structure and biosynthesis of amychelin, an unusual mixed-ligand siderophore from Amycolatopsis sp. AA4. | Journal of the American Chemical Society 20110803 |
| Genetic and biochemical analyses of chromosome and plasmid gene homologues encoding ICL and ArCP domains in Vibrio anguillarum strain 775. | Biometals : an international journal on the role of metal ions in biology, biochemistry, and medicine 20110801 |
| Increased glutamine in leaves of poplar transgenic with pine GS1a caused greater anthranilate synthetase α-subunit (ASA1) transcript and protein abundances: an auxin-related mechanism for enhanced growth in GS transgenics? | Journal of experimental botany 20110801 |
| UHPLC-ESI/TOFMS determination of salicylate-like phenolic gycosides in Populus tremula leaves. | Journal of chemical ecology 20110801 |
| Characterization of a cinnamoyl-CoA reductase 1 (CCR1) mutant in maize: effects on lignification, fibre development, and global gene expression. | Journal of experimental botany 20110701 |
| Genetic dissection of vitamin E biosynthesis in tomato. | Journal of experimental botany 20110701 |
| Application of gene targeting to designed mutation breeding of high-tryptophan rice. | Plant physiology 20110701 |
| ¹³C metabolic flux analysis identifies an unusual route for pyruvate dissimilation in mycobacteria which requires isocitrate lyase and carbon dioxide fixation. | PLoS pathogens 20110701 |
| Ligand binding induces an ammonia channel in 2-amino-2-desoxyisochorismate (ADIC) synthase PhzE. | The Journal of biological chemistry 20110520 |
| Entropic and enthalpic components of catalysis in the mutase and lyase activities of Pseudomonas aeruginosa PchB. | Journal of the American Chemical Society 20110511 |
| Improved p-hydroxybenzoate production by engineered Pseudomonas putida S12 by using a mixed-substrate feeding strategy. | Applied microbiology and biotechnology 20110501 |
| A bacterial platform for fermentative production of plant alkaloids. | Nature communications 20110501 |
| Transition-state charge stabilization through multiple non-covalent interactions in the guanidinium-catalyzed enantioselective Claisen rearrangement. | Journal of the American Chemical Society 20110406 |
| Analysis of chorismate mutase catalysis by QM/MM modelling of enzyme-catalysed and uncatalysed reactions. | Organic & biomolecular chemistry 20110307 |
| Quinolones: from antibiotics to autoinducers. | FEMS microbiology reviews 20110301 |
| A new approach to assess and predict the functional roles of proteins across all known structures. | Journal of structural and functional genomics 20110301 |
| Insights into the mechanism of type I dehydroquinate dehydratases from structures of reaction intermediates. | The Journal of biological chemistry 20110204 |
| Genetic components of stringent response in Vibrio cholerae. | The Indian journal of medical research 20110201 |
| Cytosolic NADPH balancing in Penicillium chrysogenum cultivated on mixtures of glucose and ethanol. | Applied microbiology and biotechnology 20110101 |
| The synthesis of pABA: Coupling between the glutamine amidotransferase and aminodeoxychorismate synthase domains of the bifunctional aminodeoxychorismate synthase from Arabidopsis thaliana. | Archives of biochemistry and biophysics 20110101 |
| PhMYB4 fine-tunes the floral volatile signature of Petunia x hybrida through PhC4H. | Journal of experimental botany 20110101 |
| The plant apoplasm is an important recipient compartment for nematode secreted proteins. | Journal of experimental botany 20110101 |
| Prediction of cyclin-dependent kinase 2 inhibitor potency using the fragment molecular orbital method. | Journal of cheminformatics 20110101 |
| Massive genomic decay in Serratia symbiotica, a recently evolved symbiont of aphids. | Genome biology and evolution 20110101 |
| Identification and functional characterization of small non-coding RNAs in Xanthomonas oryzae pathovar oryzae. | BMC genomics 20110101 |
| Essential metabolites of Mycobacterium tuberculosis and their mimics. | mBio 20110101 |
| Cooperative adaptation to establishment of a synthetic bacterial mutualism. | PloS one 20110101 |
| Understanding the structure, activity and inhibition of chorismate synthase from Mycobacterium tuberculosis. | Current medicinal chemistry 20110101 |
| Genomic heterogeneity within conservedmetabolic pathways of Arthrobacter species - a bioinformatic approach. | Bioinformation 20110101 |
| Reactive oxygen species and transcript analysis upon excess light treatment in wild-type Arabidopsis thaliana vs a photosensitive mutant lacking zeaxanthin and lutein. | BMC plant biology 20110101 |
| Exploiting the high-resolution crystal structure of Staphylococcus aureus MenH to gain insight into enzyme activity. | BMC structural biology 20110101 |
| Analysis of the transcriptome of the root lesion nematode Pratylenchus coffeae generated by 454 sequencing technology. | Molecular and biochemical parasitology 20110101 |
| WRKY transcription factors involved in activation of SA biosynthesis genes. | BMC plant biology 20110101 |
| Comparative transcriptome analysis of Bacillus subtilis responding to dissolved oxygen in adenosine fermentation. | PloS one 20110101 |
| Genetic approach for the fast discovery of phenazine producing bacteria. | Marine drugs 20110101 |
| Dynamics of gene duplication in the genomes of chlorophyll d-producing cyanobacteria: implications for the ecological niche. | Genome biology and evolution 20110101 |
| Simplivariate models: uncovering the underlying biology in functional genomics data. | PloS one 20110101 |
| Genome fluctuations in cyanobacteria reflect evolutionary, developmental and adaptive traits. | BMC evolutionary biology 20110101 |
| The role of the C8 proton of ATP in the regulation of phosphoryl transfer within kinases and synthetases. | BMC biochemistry 20110101 |
| The cross-pathway control system regulates production of the secondary metabolite toxin, sirodesmin PL, in the ascomycete, Leptosphaeria maculans. | BMC microbiology 20110101 |
| SEAS: a system for SEED-based pathway enrichment analysis. | PloS one 20110101 |
| Comparative analyses imply that the enigmatic Sigma factor 54 is a central controller of the bacterial exterior. | BMC genomics 20110101 |
| Comparative genomic reconstruction of transcriptional networks controlling central metabolism in the Shewanella genus. | BMC genomics 20110101 |
| A retrosynthetic biology approach to metabolic pathway design for therapeutic production. | BMC systems biology 20110101 |
| A systems approach to identifying correlated gene targets for the loss of colour pigmentation in plants. | BMC bioinformatics 20110101 |
| Atomic resolution structure of EhpR: phenazine resistance in Enterobacter agglomerans Eh1087 follows principles of bleomycin/mitomycin C resistance in other bacteria. | BMC structural biology 20110101 |
| The ACR11 encodes a novel type of chloroplastic ACT domain repeat protein that is coordinately expressed with GLN2 in Arabidopsis. | BMC plant biology 20110101 |
| Metabolic engineering of the L-phenylalanine pathway in Escherichia coli for the production of S- or R-mandelic acid. | Microbial cell factories 20110101 |
| Hybrid schemes based on quantum mechanics/molecular mechanics simulations goals to success, problems, and perspectives. | Advances in protein chemistry and structural biology 20110101 |
| Silver nanoparticles embedded in zeolite membranes: release of silver ions and mechanism of antibacterial action. | International journal of nanomedicine 20110101 |
| Pseudomonas aeruginosa 4-amino-4-deoxychorismate lyase: spatial conservation of an active site tyrosine and classification of two types of enzyme. | PloS one 20110101 |
| Bioactive pigments from marine bacteria: applications and physiological roles. | Evidence-based complementary and alternative medicine : eCAM 20110101 |
| Specialized adaptation of a lactic acid bacterium to the milk environment: the comparative genomics of Streptococcus thermophilus LMD-9. | Microbial cell factories 20110101 |
| The energy landscape analysis of cancer mutations in protein kinases. | PloS one 20110101 |
| The complete genome sequence of Thermoproteus tenax: a physiologically versatile member of the Crenarchaeota. | PloS one 20110101 |
| Tissue specific diurnal rhythms of metabolites and their regulation during herbivore attack in a native tobacco, Nicotiana attenuata. | PloS one 20110101 |
| A high throughput barley stripe mosaic virus vector for virus induced gene silencing in monocots and dicots. | PloS one 20110101 |
| Ulcerogenic Helicobacter pylori strains isolated from children: a contribution to get insight into the virulence of the bacteria. | PloS one 20110101 |
| Complete genome sequence of Corynebacterium variabile DSM 44702 isolated from the surface of smear-ripened cheeses and insights into cheese ripening and flavor generation. | BMC genomics 20110101 |
| L-Tryptophan Production by Auxotrophic and Analogue Resistant Mutants of Aureobacterium flavescens. | International journal of tryptophan research : IJTR 20110101 |
| Dynamic proteomic profiling of a unicellular cyanobacterium Cyanothece ATCC51142 across light-dark diurnal cycles. | BMC systems biology 20110101 |
| A conformational switch in the active site of BT_2972, a methyltransferase from an antibiotic resistant pathogen B. thetaiotaomicron. | PloS one 20110101 |
| Protein surface characterization using an invariant descriptor. | International journal of biomedical imaging 20110101 |
| Defense mechanisms against herbivory in Picea: sequence evolution and expression regulation of gene family members in the phenylpropanoid pathway. | BMC genomics 20110101 |
| Structural constraints on the covariance matrix derived from multiple aligned protein sequences. | PloS one 20110101 |
| Identification of a novel gene for biosynthesis of a bacteroid-specific electron carrier menaquinone. | PloS one 20110101 |
| Folate production by probiotic bacteria. | Nutrients 20110101 |
| Genome-wide essential gene identification in Streptococcus sanguinis. | Scientific reports 20110101 |
| Allele mining in barley genetic resources reveals genes of race-non-specific powdery mildew resistance. | Frontiers in plant science 20110101 |
| System-level strategies for studying the metabolism of Mycobacterium tuberculosis. | Molecular bioSystems 20101208 |
| New insights into the shikimate and aromatic amino acids biosynthesis pathways in plants. | Molecular plant 20101101 |
| Amino acid homeostasis modulates salicylic acid-associated redox status and defense responses in Arabidopsis. | The Plant cell 20101101 |
| Structures of the first representatives of Pfam family PF06684 (DUF1185) reveal a novel variant of the Bacillus chorismate mutase fold and suggest a role in amino-acid metabolism. | Acta crystallographica. Section F, Structural biology and crystallization communications 20101001 |
| The structure of Haemophilus influenzae prephenate dehydrogenase suggests unique features of bifunctional TyrA enzymes. | Acta crystallographica. Section F, Structural biology and crystallization communications 20101001 |
| para-Aminobenzoic acid is a precursor in coenzyme Q6 biosynthesis in Saccharomyces cerevisiae. | The Journal of biological chemistry 20100903 |
| A stable analog of isochorismate for the study of MenD and other isochorismate-utilizing enzymes. | Bioorganic & medicinal chemistry letters 20100901 |
| The genome of a pathogenic rhodococcus: cooptive virulence underpinned by key gene acquisitions. | PLoS genetics 20100901 |
| Pocket similarity: are alpha carbons enough? | Journal of chemical information and modeling 20100823 |
| Accumulation of isochorismate-derived 2,3-dihydroxybenzoic 3-O-beta-D-xyloside in arabidopsis resistance to pathogens and ageing of leaves. | The Journal of biological chemistry 20100813 |
| Structure and reactivity of Bacillus subtilis MenD catalyzing the first committed step in menaquinone biosynthesis. | Journal of molecular biology 20100813 |
| Inhibition of chorismate-utilising enzymes by 2-amino-4-carboxypyridine and 4-carboxypyridone and 5-carboxypyridone analogues. | Organic & biomolecular chemistry 20100807 |
| Disruption of signaling in a fungal-grass symbiosis leads to pathogenesis. | Plant physiology 20100801 |
| A rice fungal MAMP-responsive MAPK cascade regulates metabolic flow to antimicrobial metabolite synthesis. | The Plant journal : for cell and molecular biology 20100801 |
| Functional analysis of the Arabidopsis PAL gene family in plant growth, development, and response to environmental stress. | Plant physiology 20100801 |
| Antituberculosis agents and an inhibitor of the para-aminobenzoic acid biosynthetic pathway from Hydnocarpus anthelminthica seeds. | Chemistry & biodiversity 20100801 |
| Inhibition studies of Mycobacterium tuberculosis salicylate synthase (MbtI). | ChemMedChem 20100705 |
| Reduced synthesis of the Ybt siderophore or production of aberrant Ybt-like molecules activates transcription of yersiniabactin genes in Yersinia pestis. | Microbiology (Reading, England) 20100701 |
| Roles of trpE2, entC and entD in salicylic acid biosynthesis in Mycobacterium smegmatis. | FEMS microbiology letters 20100701 |
| Genome-wide screen in Saccharomyces cerevisiae identifies vacuolar protein sorting, autophagy, biosynthetic, and tRNA methylation genes involved in life span regulation. | PLoS genetics 20100701 |
| Consensus protein design without phylogenetic bias. | Journal of molecular biology 20100618 |
| A new mode of dimerization of allosteric enzymes with ACT domains revealed by the crystal structure of the aspartate kinase from Cyanobacteria. | Journal of molecular biology 20100604 |
| Crucial roles of membrane stability and its related proteins in the tolerance of peach fruit to chilling injury. | Amino acids 20100601 |
| Metabolic profiling reveals local and systemic responses of host plants to nematode parasitism. | The Plant journal : for cell and molecular biology 20100601 |
| Structure of the D-alanylgriseoluteic acid biosynthetic protein EhpF, an atypical member of the ANL superfamily of adenylating enzymes. | Acta crystallographica. Section D, Biological crystallography 20100601 |
| Effects of point mutation on enzymatic activity: correlation between protein electronic structure and motion in chorismate mutase reaction. | Journal of the American Chemical Society 20100526 |
| Targeting multiple chorismate-utilizing enzymes with a single inhibitor: validation of a three-stage design. | Journal of medicinal chemistry 20100513 |
| Rapid dissection of a complex phenotype through genomic-scale mapping of fitness altering genes. | Metabolic engineering 20100501 |
| Design, selection, and characterization of a split chorismate mutase. | Protein science : a publication of the Protein Society 20100501 |
| Metabolism and function of phenazines in bacteria: impacts on the behavior of bacteria in the environment and biotechnological processes. | Applied microbiology and biotechnology 20100501 |
| Genome sequence of the plant growth promoting endophytic bacterium Enterobacter sp. 638. | PLoS genetics 20100501 |
| Nucleophile specificity in anthranilate synthase, aminodeoxychorismate synthase, isochorismate synthase, and salicylate synthase. | Biochemistry 20100406 |
| Nonhost resistance of barley to different fungal pathogens is associated with largely distinct, quantitative transcriptional responses. | Plant physiology 20100401 |
| AtNUDX6, an ADP-ribose/NADH pyrophosphohydrolase in Arabidopsis, positively regulates NPR1-dependent salicylic acid signaling. | Plant physiology 20100401 |
| Succinylphosphonate esters are competitive inhibitors of MenD that show active-site discrimination between homologous alpha-ketoglutarate-decarboxylating enzymes. | Biochemistry 20100330 |
| Crystal structure of Escherichia coli enterobactin-specific isochorismate synthase (EntC) bound to its reaction product isochorismate: implications for the enzyme mechanism and differential activity of chorismate-utilizing enzymes. | Journal of molecular biology 20100319 |
| Reconstruction of metabolic pathways, protein expression, and homeostasis machineries across maize bundle sheath and mesophyll chloroplasts: large-scale quantitative proteomics using the first maize genome assembly. | Plant physiology 20100301 |
| Xanthomonas oryzae pv. oryzae XKK.12 contains an AroQgamma chorismate mutase that is involved in rice virulence. | Phytopathology 20100301 |
| Theoretical QM/MM studies of enzymatic pericyclic reactions. | Interdisciplinary sciences, computational life sciences 20100301 |
| Mycobacterium tuberculosis Rv2704 is a member of the YjgF/YER057c/UK114 family. | Proteins 20100215 |
| Silencing of Vlaro2 for chorismate synthase revealed that the phytopathogen Verticillium longisporum induces the cross-pathway control in the xylem. | Applied microbiology and biotechnology 20100201 |
| Flavonoid profiling and transcriptome analysis reveals new gene-metabolite correlations in tubers of Solanum tuberosum L. | Journal of experimental botany 20100201 |
| Discovery of 3-formyl-tyrosine metabolites from Pseudoalteromonas tunicata through heterologous expression. | Journal of the American Chemical Society 20100127 |
| Nuclear localization of NPR1 is required for regulation of salicylate tolerance, isochorismate synthase 1 expression and salicylate accumulation in Arabidopsis. | Journal of plant physiology 20100115 |
| Effects of growth conditions on biofilm formation by Actinobacillus pleuropneumoniae. | Veterinary research 20100101 |
| A petunia chorismate mutase specialized for the production of floral volatiles. | The Plant journal : for cell and molecular biology 20100101 |
| High-throughput virtual screening of proteins using GRID molecular interaction fields. | Journal of chemical information and modeling 20100101 |
| SKPDB: a structural database of shikimate pathway enzymes. | BMC bioinformatics 20100101 |
| LucidDraw: efficiently visualizing complex biochemical networks within MATLAB. | BMC bioinformatics 20100101 |
| Proteomic analysis of iron acquisition, metabolic and regulatory responses of Yersinia pestis to iron starvation. | BMC microbiology 20100101 |
| Comparative classification of species and the study of pathway evolution based on the alignment of metabolic pathways. | BMC bioinformatics 20100101 |
| Coping with antibiotic resistance: contributions from genomics. | Genome medicine 20100101 |
| Legionella pneumophila pangenome reveals strain-specific virulence factors. | BMC genomics 20100101 |
| Transcriptional profiling of an Fd-GOGAT1/GLU1 mutant in Arabidopsis thaliana reveals a multiple stress response and extensive reprogramming of the transcriptome. | BMC genomics 20100101 |
| Metabolic engineering for the production of shikimic acid in an evolved Escherichia coli strain lacking the phosphoenolpyruvate: carbohydrate phosphotransferase system. | Microbial cell factories 20100101 |
| Novel anti-infective compounds from marine bacteria. | Marine drugs 20100101 |
| Protein evolution via amino acid and codon elimination. | PloS one 20100101 |
| Analysis of gene evolution and metabolic pathways using the Candida Gene Order Browser. | BMC genomics 20100101 |
| The complete genome sequence of Cupriavidus metallidurans strain CH34, a master survivalist in harsh and anthropogenic environments. | PloS one 20100101 |
| Large scale physiological readjustment during growth enables rapid, comprehensive and inexpensive systems analysis. | BMC systems biology 20100101 |
| Absence of functional TolC protein causes increased stress response gene expression in Sinorhizobium meliloti. | BMC microbiology 20100101 |
| Mobile genetic element proliferation and gene inactivation impact over the genome structure and metabolic capabilities of Sodalis glossinidius, the secondary endosymbiont of tsetse flies. | BMC genomics 20100101 |
| Selective control of amino acid metabolism by the GCN2 eIF2 kinase pathway in Saccharomyces cerevisiae. | BMC biochemistry 20100101 |
| Systems approach to investigating host-pathogen interactions in infections with the biothreat agent Francisella. Constraints-based model of Francisella tularensis. | BMC systems biology 20100101 |
| Genes and pathways for CO2 fixation in the obligate, chemolithoautotrophic acidophile, Acidithiobacillus ferrooxidans, carbon fixation in A. ferrooxidans. | BMC microbiology 20100101 |
| Antimalarial drug targets in Plasmodium falciparum predicted by stage-specific metabolic network analysis. | BMC systems biology 20100101 |
| A transcriptomic approach highlights induction of secondary metabolism in citrus fruit in response to Penicillium digitatum infection. | BMC plant biology 20100101 |
| Transcriptional profile of maize roots under acid soil growth. | BMC plant biology 20100101 |
| The genome of Geobacter bemidjiensis, exemplar for the subsurface clade of Geobacter species that predominate in Fe(III)-reducing subsurface environments. | BMC genomics 20100101 |
| MetNetGE: interactive views of biological networks and ontologies. | BMC bioinformatics 20100101 |
| The extracellular proteome of Rhizobium etli CE3 in exponential and stationary growth phase. | Proteome science 20100101 |
| Catalytic mechanism of cellulose degradation by a cellobiohydrolase, CelS. | PloS one 20100101 |
| Global genome analysis of the shikimic acid pathway reveals greater gene loss in host-associated than in free-living bacteria. | BMC genomics 20100101 |
| The arthrobacter arilaitensis Re117 genome sequence reveals its genetic adaptation to the surface of cheese. | PloS one 20100101 |
| Evolutionary innovations and the organization of protein functions in genotype space. | PloS one 20100101 |
| Identification and Partial Characterization of an L-Tyrosine Aminotransferase (TAT) from Arabidopsis thaliana. | Biochemistry research international 20100101 |
| Francisella tularensis metabolism and its relation to virulence. | Frontiers in microbiology 20100101 |
| The Biosynthetic Pathways for Shikimate and Aromatic Amino Acids in Arabidopsis thaliana. | The arabidopsis book 20100101 |
| Metabolic changes of salicylic acid-elicited Catharanthus roseus cell suspension cultures monitored by NMR-based metabolomics. | Biotechnology letters 20091201 |
| Mechanism and plasticity of isochorismate pyruvate lyase: a computational study. | Journal of the American Chemical Society 20091111 |
| Folate biofortification of lettuce by expression of a codon optimized chicken GTP cyclohydrolase I gene. | Transgenic research 20091001 |
| Expression of a bacterial bi-functional chorismate mutase/prephenate dehydratase modulates primary and secondary metabolism associated with aromatic amino acids in Arabidopsis. | The Plant journal : for cell and molecular biology 20091001 |
| Genetic and biochemical identification of the chorismate mutase from Corynebacterium glutamicum. | Microbiology (Reading, England) 20091001 |
| A proteomic view into infection of greyback canegrubs (Dermolepida albohirtum) by Metarhizium anisopliae. | Current genetics 20091001 |
| The Modular Organization of Protein Interactions in Escherichia coli. | PLoS computational biology 20091001 |
| A novel noncovalent complex of chorismate mutase and DAHP synthase from Mycobacterium tuberculosis: protein purification, crystallization and X-ray diffraction analysis. | Acta crystallographica. Section F, Structural biology and crystallization communications 20091001 |
| Of two make one: the biosynthesis of phenazines. | Chembiochem : a European journal of chemical biology 20090921 |
| Exploration of uncharted regions of the protein universe. | PLoS biology 20090901 |
| On-the-path random walk sampling for efficient optimization of minimum free-energy path. | Journal of computational chemistry 20090801 |
| Chemical diversity and defence metabolism: how plants cope with pathogens and ozone pollution. | International journal of molecular sciences 20090801 |
| Structure and function of a complex between chorismate mutase and DAHP synthase: efficiency boost for the junior partner. | The EMBO journal 20090722 |
| Tobacco plastid transformation using the feedback-insensitive anthranilate synthase [alpha]-subunit of tobacco (ASA2) as a new selectable marker. | Journal of experimental botany 20090701 |
| An alternative menaquinone biosynthetic pathway operating in microorganisms: an attractive target for drug discovery to pathogenic Helicobacter and Chlamydia strains. | The Journal of antibiotics 20090701 |
| 2-All-yloxy-5-nitro-benzoic acid. | Acta crystallographica. Section E, Structure reports online 20090701 |
| Structure-function analyses of isochorismate-pyruvate lyase from Pseudomonas aeruginosa suggest differing catalytic mechanisms for the two pericyclic reactions of this bifunctional enzyme. | Biochemistry 20090616 |
| Synthesis and evaluation of 2,5-dihydrochorismate analogues as inhibitors of the chorismate-utilising enzymes. | Organic & biomolecular chemistry 20090607 |
| Antitumor compounds from marine actinomycetes. | Marine drugs 20090601 |
| Biosynthesis of salicylic acid in plants. | Plant signaling & behavior 20090601 |
| Elucidation of the biochemical pathway of 2-phenylethanol from shikimic acid using isolated protoplasts of rose flowers. | Journal of plant physiology 20090515 |
| Enzymatic properties of futalosine hydrolase, an enzyme essential to a newly identified menaquinone biosynthetic pathway. | Bioscience, biotechnology, and biochemistry 20090501 |
| Toward accurate screening in computer-aided enzyme design. | Biochemistry 20090414 |
| Arabidopsis GH3.12 (PBS3) conjugates amino acids to 4-substituted benzoates and is inhibited by salicylate. | The Journal of biological chemistry 20090410 |
| The empirical valence bond as an effective strategy for computer-aided enzyme design. | Biotechnology journal 20090401 |
| Ferric reductase A is essential for effective iron acquisition in Paracoccus denitrificans. | Microbiology (Reading, England) 20090401 |
| 2-Amino-2-deoxyisochorismate is a key intermediate in Bacillus subtilis p-aminobenzoic acid biosynthesis. | Journal of the American Chemical Society 20090318 |
| Purification and characterization of anthranilate synthase component I (TrpE) from Mycobacterium tuberculosis H37Rv. | Protein expression and purification 20090301 |
| Tyrosine and phenylalanine are synthesized within the plastids in Arabidopsis. | Plant physiology 20090301 |
| Salicylic acid deficiency in NahG transgenic lines and sid2 mutants increases seed yield in the annual plant Arabidopsis thaliana. | Journal of experimental botany 20090301 |
| Structural and functional investigation of a secreted chorismate mutase from the plant-parasitic nematode Heterodera schachtii in the context of related enzymes from diverse origins. | Molecular plant pathology 20090301 |
| Functional contribution of chorismate synthase, anthranilate synthase, and chorismate mutase to penetration resistance in barley-powdery mildew interactions. | Molecular plant-microbe interactions : MPMI 20090301 |
| Genome-scale reconstruction of Escherichia coli's transcriptional and translational machinery: a knowledge base, its mathematical formulation, and its functional characterization. | PLoS computational biology 20090301 |
| Structural studies of shikimate dehydrogenase from Bacillus anthracis complexed with cofactor NADP. | Journal of molecular modeling 20090201 |
| Lines of evidence for horizontal gene transfer of a phenazine producing operon into multiple bacterial species. | Journal of molecular evolution 20090201 |
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| Characterization of a key trifunctional enzyme for aromatic amino acid biosynthesis in Archaeoglobus fulgidus. | Extremophiles : life under extreme conditions 20090101 |
| Coordinations between gene modules control the operation of plant amino acid metabolic networks. | BMC systems biology 20090101 |
| Sequence mining and transcript profiling to explore cyst nematode parasitism. | BMC genomics 20090101 |
| The Staphylococcus aureus response to unsaturated long chain free fatty acids: survival mechanisms and virulence implications. | PloS one 20090101 |
| Diverse protein regulations on PHA formation in Ralstonia eutropha on short chain organic acids. | International journal of biological sciences 20090101 |
| Uncovering metabolic pathways relevant to phenotypic traits of microbial genomes. | Genome biology 20090101 |
| Population-specific gene expression in the plant pathogenic nematode Heterodera glycines exists prior to infection and during the onset of a resistant or susceptible reaction in the roots of the Glycine max genotype Peking. | BMC genomics 20090101 |
| Snapshot of iron response in Shewanella oneidensis by gene network reconstruction. | BMC genomics 20090101 |
| Metabolic engineering for improving anthranilate synthesis from glucose in Escherichia coli. | Microbial cell factories 20090101 |
| Water deficit alters differentially metabolic pathways affecting important flavor and quality traits in grape berries of Cabernet Sauvignon and Chardonnay. | BMC genomics 20090101 |
| The genome sequence of Geobacter metallireducens: features of metabolism, physiology and regulation common and dissimilar to Geobacter sulfurreducens. | BMC microbiology 20090101 |
| Heme and menaquinone induced electron transport in lactic acid bacteria. | Microbial cell factories 20090101 |
| Deciphering the connectivity structure of biological networks using MixNet. | BMC bioinformatics 20090101 |
| A single transcription factor regulates evolutionarily diverse but functionally linked metabolic pathways in response to nutrient availability. | Molecular systems biology 20090101 |
| The complete genome of Teredinibacter turnerae T7901: an intracellular endosymbiont of marine wood-boring bivalves (shipworms). | PloS one 20090101 |
| A comparative genomics approach to understanding the biosynthesis of the sunscreen scytonemin in cyanobacteria. | BMC genomics 20090101 |
| Grapevine cell early activation of specific responses to DIMEB, a resveratrol elicitor. | BMC genomics 20090101 |
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| 2-DE analysis indicates that Acinetobacter baumannii displays a robust and versatile metabolism. | Proteome science 20090101 |
| Genome sequence of the versatile fish pathogen Edwardsiella tarda provides insights into its adaptation to broad host ranges and intracellular niches. | PloS one 20090101 |
| The transcriptome of the nosocomial pathogen Enterococcus faecalis V583 reveals adaptive responses to growth in blood. | PloS one 20090101 |
| Network analysis of the transcriptional pattern of young and old cells of Escherichia coli during lag phase. | BMC systems biology 20090101 |
| The transcriptional programme of Salmonella enterica serovar Typhimurium reveals a key role for tryptophan metabolism in biofilms. | BMC genomics 20090101 |
| Functional analysis of aromatic biosynthetic pathways in Pseudomonas putida KT2440. | Microbial biotechnology 20090101 |
| Relative tolerance of an enzymatic molten globule and its thermostable counterpart to point mutation. | Biochemistry 20081223 |
| PhzA/B catalyzes the formation of the tricycle in phenazine biosynthesis. | Journal of the American Chemical Society 20081217 |
| Engineered native pathways for high kaempferol and caffeoylquinate production in potato. | Plant biotechnology journal 20081201 |
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| Comprehensive transcriptome analysis of phytohormone biosynthesis and signaling genes in microspore/pollen and tapetum of rice. | Plant & cell physiology 20081001 |
| A comparative biochemical and structural analysis of the intracellular chorismate mutase (Rv0948c) from Mycobacterium tuberculosis H(37)R(v) and the secreted chorismate mutase (y2828) from Yersinia pestis. | The FEBS journal 20081001 |
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| CHARMMing: a new, flexible web portal for CHARMM. | Journal of chemical information and modeling 20080901 |
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| Characterization and biological function of the ISOCHORISMATE SYNTHASE2 gene of Arabidopsis. | Plant physiology 20080701 |
| Chemical and genetic validation of dihydrofolate reductase-thymidylate synthase as a drug target in African trypanosomes. | Molecular microbiology 20080701 |
| A computational framework to empower probabilistic protein design. | Bioinformatics (Oxford, England) 20080701 |
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| Replacement of two invariant serine residues in chorismate synthase provides evidence that a proton relay system is essential for intermediate formation and catalytic activity. | The FEBS journal 20080401 |
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| Quantitative 1H NMR metabolomics reveals extensive metabolic reprogramming of primary and secondary metabolism in elicitor-treated opium poppy cell cultures. | BMC plant biology 20080101 |
| Coutilization of glucose and glycerol enhances the production of aromatic compounds in an Escherichia coli strain lacking the phosphoenolpyruvate: carbohydrate phosphotransferase system. | Microbial cell factories 20080101 |
| The tryptophan pathway genes of the Sargasso Sea metagenome: new operon structures and the prevalence of non-operon organization. | Genome biology 20080101 |
| Use of the lambda Red recombinase system to rapidly generate mutants in Pseudomonas aeruginosa. | BMC molecular biology 20080101 |
| Reconstruction and analysis of the genetic and metabolic regulatory networks of the central metabolism of Bacillus subtilis. | BMC systems biology 20080101 |
| A complete collection of single-gene deletion mutants of Acinetobacter baylyi ADP1. | Molecular systems biology 20080101 |
| Alleviation of feedback inhibition in Saccharomyces cerevisiae aromatic amino acid biosynthesis: quantification of metabolic impact. | Metabolic engineering 20080101 |
| Metabolic pathways of the wheat (Triticum aestivum) endosperm amyloplast revealed by proteomics. | BMC plant biology 20080101 |
| Characterisation of the tryptophan synthase alpha subunit in maize. | BMC plant biology 20080101 |
| Evidence of a chimeric genome in the cyanobacterial ancestor of plastids. | BMC evolutionary biology 20080101 |
| The Mycobacterium tuberculosis Rv2540c DNA sequence encodes a bifunctional chorismate synthase. | BMC biochemistry 20080101 |
| The hidden universal distribution of amino acid biosynthetic networks: a genomic perspective on their origins and evolution. | Genome biology 20080101 |
| Evidence of recent interkingdom horizontal gene transfer between bacteria and Candida parapsilosis. | BMC evolutionary biology 20080101 |
| Expression of cell wall related genes in basal and ear internodes of silking brown-midrib-3, caffeic acid O-methyltransferase (COMT) down-regulated, and normal maize plants. | BMC plant biology 20080101 |
| An in silico analysis of T-box regulated genes and T-box evolution in prokaryotes, with emphasis on prediction of substrate specificity of transporters. | BMC genomics 20080101 |
| The transcriptional program underlying the physiology of clostridial sporulation. | Genome biology 20080101 |
| The fused TrpEG from Streptomyces venezuelae is an anthranilate synthase, not a 2-amino-2-deoxyisochorismate [corrected] (ADIC) synthase. | Ethnicity & disease 20080101 |
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| Organogenic nodule development in hop (Humulus lupulus L.): transcript and metabolic responses. | BMC genomics 20080101 |
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| Linking gene regulation and the exo-metabolome: a comparative transcriptomics approach to identify genes that impact on the production of volatile aroma compounds in yeast. | BMC genomics 20080101 |
| Architecture of thermal adaptation in an Exiguobacterium sibiricum strain isolated from 3 million year old permafrost: a genome and transcriptome approach. | BMC genomics 20080101 |
| Comparative genomics of vesicomyid clam (Bivalvia: Mollusca) chemosynthetic symbionts. | BMC genomics 20080101 |
| Acidithiobacillus ferrooxidans metabolism: from genome sequence to industrial applications. | BMC genomics 20080101 |
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| A simple selection strategy for evolving highly efficient enzymes. | Nature biotechnology 20071001 |
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| Exploring SCC-DFTB paths for mapping QM/MM reaction mechanisms. | The journal of physical chemistry. A 20070705 |
| Exhaustive mutagenesis of six secondary active-site residues in Escherichia coli chorismate mutase shows the importance of hydrophobic side chains and a helix N-capping position for stability and catalysis. | Biochemistry 20070612 |
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| From scratch to value: engineering Escherichia coli wild type cells to the production of L-phenylalanine and other fine chemicals derived from chorismate. | Applied microbiology and biotechnology 20070601 |
| A transition path sampling study of the reaction catalyzed by the enzyme chorismate mutase. | The journal of physical chemistry. B 20070524 |
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| Mutagenic analysis of an invariant aspartate residue in chorismate synthase supports its role as an active site base. | Biochemistry 20070327 |
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| Chorismate synthase: an attractive target for drug development against orphan diseases. | Current drug targets 20070301 |
| Arabidopsis isochorismate synthase functional in pathogen-induced salicylate biosynthesis exhibits properties consistent with a role in diverse stress responses. | The Journal of biological chemistry 20070223 |
| Structural and functional analysis of the pyocyanin biosynthetic protein PhzM from Pseudomonas aeruginosa. | Biochemistry 20070220 |
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| Modelling the evolution of the archeal tryptophan synthase. | BMC evolutionary biology 20070101 |
| Toward the automated generation of genome-scale metabolic networks in the SEED. | BMC bioinformatics 20070101 |
| The crystal structure of Escherichia coli TdcF, a member of the highly conserved YjgF/YER057c/UK114 family. | BMC structural biology 20070101 |
| Comparative genomics of bacterial and plant folate synthesis and salvage: predictions and validations. | BMC genomics 20070101 |
| An 'Electronic Fluorescent Pictograph' browser for exploring and analyzing large-scale biological data sets. | PloS one 20070101 |
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| Chemical accuracy in QM/MM calculations on enzyme-catalysed reactions. | Chemistry Central journal 20070101 |
| Developing a systems biology approach to study disease progression caused by Heterodera glycines in Glycine max. | Gene regulation and systems biology 20070101 |
| Redesigning the PheA domain of gramicidin synthetase leads to a new understanding of the enzyme's mechanism and selectivity. | Biochemistry 20061226 |
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| Novel benzene ring biosynthesis from C(3) and C(4) primary metabolites by two enzymes. | The Journal of biological chemistry 20061201 |
| Calculation of smooth potential energy surfaces using local electron correlation methods. | The Journal of chemical physics 20061114 |
| Two crystal structures of the isochorismate pyruvate lyase from Pseudomonas aeruginosa. | The Journal of biological chemistry 20061103 |
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| High-accuracy computation of reaction barriers in enzymes. | Angewandte Chemie (International ed. in English) 20061020 |
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| The 2.15 A crystal structure of Mycobacterium tuberculosis chorismate mutase reveals an unexpected gene duplication and suggests a role in host-pathogen interactions. | Biochemistry 20060613 |
| Isolation and characterization of another cDNA encoding a chorismate mutase from the phytoparasitic nematode Meloidogyne arenaria. | Experimental parasitology 20060601 |
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| 1.6 A crystal structure of the secreted chorismate mutase from Mycobacterium tuberculosis: novel fold topology revealed. | Journal of molecular biology 20060414 |
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| Conversion of MapMan to allow the analysis of transcript data from Solanaceous species: effects of genetic and environmental alterations in energy metabolism in the leaf. | Plant molecular biology 20060301 |
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| PIRSF family classification system for protein functional and evolutionary analysis. | Evolutionary bioinformatics online 20060101 |
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| The structure of 3-deoxy-d-arabino-heptulosonate 7-phosphate synthase from Mycobacterium tuberculosis reveals a common catalytic scaffold and ancestry for type I and type II enzymes. | Journal of molecular biology 20051209 |
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| An active enzyme constructed from a 9-amino acid alphabet. | The Journal of biological chemistry 20051111 |
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| Chorismate derived C6C1 compounds in plants. | Planta 20050901 |
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| Mechanistic and inhibition studies of chorismate-utilizing enzymes. | Biochemical Society transactions 20050801 |
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| Shikimate and folate pathways in the protozoan parasite, Perkinsus olseni. | Molecular and biochemical parasitology 20050701 |
| Away from the edge II: in-house Se-SAS phasing with chromium radiation. | Acta crystallographica. Section D, Biological crystallography 20050701 |
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| Construction and characterization of Pichia pastoris strains for labeling aromatic amino acids in recombinant proteins. | Protein expression and purification 20050601 |
| Selection of Heterodera glycines chorismate mutase-1 alleles on nematode-resistant soybean. | Molecular plant-microbe interactions : MPMI 20050601 |
| pheA (Rv3838c) of Mycobacterium tuberculosis encodes an allosterically regulated monofunctional prephenate dehydratase that requires both catalytic and regulatory domains for optimum activity. | The Journal of biological chemistry 20050527 |
| Inhibition studies on salicylate synthase. | Organic & biomolecular chemistry 20050521 |
| Purified recombinant hypothetical protein coded by open reading frame Rv1885c of Mycobacterium tuberculosis exhibits a monofunctional AroQ class of periplasmic chorismate mutase activity. | The Journal of biological chemistry 20050520 |
| Multiple-steering QM-MM calculation of the free energy profile in chorismate mutase. | Journal of the American Chemical Society 20050518 |
| Investigation of ligand binding and protein dynamics in Bacillus subtilis chorismate mutase by transverse relaxation optimized spectroscopy-nuclear magnetic resonance. | Biochemistry 20050510 |
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| Initial evaluation of sugarcane as a production platform for p-hydroxybenzoic acid. | Plant biotechnology journal 20050101 |
| Two chorismate mutase genes from the root-knot nematode Meloidogyne incognita. | Molecular plant pathology 20050101 |
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| Metabolic engineering of the chloroplast genome using the Echerichia coli ubiC gene reveals that chorismate is a readily abundant plant precursor for p-hydroxybenzoic acid biosynthesis. | Plant physiology 20041201 |
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| A comparative study of claisen and cope rearrangements catalyzed by chorismate mutase. An insight into enzymatic efficiency: transition state stabilization or substrate preorganization? | Journal of the American Chemical Society 20040114 |
| Crystal structure of the bifunctional chorismate synthase from Saccharomyces cerevisiae. | The Journal of biological chemistry 20040102 |
| The purification, crystallization and preliminary structural characterization of PhzF, a key enzyme in the phenazine-biosynthesis pathway from Pseudomonas fluorescens 2-79. | Acta crystallographica. Section D, Biological crystallography 20040101 |
| In silico identification and experimental validation of PmrAB targets in Salmonella typhimurium by regulatory motif detection. | Genome biology 20040101 |
| Network analysis of metabolic enzyme evolution in Escherichia coli. | BMC bioinformatics 20040101 |
| In vitro reconstitution of rice anthranilate synthase: distinct functional properties of the alpha subunits OASA1 and OASA2. | Plant molecular biology 20040101 |
| A homotropic two-state model and auto-antagonism. | BMC pharmacology 20040101 |
| New enzymes from combinatorial library modules. | Methods in enzymology 20040101 |
| High society (of nematologists). | Genome biology 20040101 |
| Integrating phenotypic and expression profiles to map arsenic-response networks. | Genome biology 20040101 |
| Quantitative evaluation of noncovalent chorismate mutase-inhibitor binding by ESI-MS. | Journal of the American Society for Mass Spectrometry 20031201 |
| Steady-state kinetics and molecular evolution of Escherichia coli MenD [(1R,6R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase], an anomalous thiamin diphosphate-dependent decarboxylase-carboligase. | Biochemistry 20031125 |
| (De)regulation of key enzyme steps in the shikimate pathway and phenylalanine-specific pathway of the actinomycete Amycolatopsis methanolica. | Microbiology (Reading, England) 20031101 |
| Crystal structure of Mycobacterium tuberculosis MenB, a key enzyme in vitamin K2 biosynthesis. | The Journal of biological chemistry 20031024 |
| (S,S)-2,3-Dihydroxy-2,3-dihydrobenzoic acid: microbial access with engineered cells of Escherichia coli and application as starting material in natural-product synthesis. | Chemistry (Weinheim an der Bergstrasse, Germany) 20030905 |
| Just a near attack conformer for catalysis (chorismate to prephenate rearrangements in water, antibody, enzymes, and their mutants). | Journal of the American Chemical Society 20030903 |
| Apparent NAC effect in chorismate mutase reflects electrostatic transition state stabilization. | Journal of the American Chemical Society 20030827 |
| Easy access to (R,R)-3,4-dihydroxy-3,4-dihydrobenzoic acid with engineered strains of Escherichia coli. | Chembiochem : a European journal of chemical biology 20030804 |
| The salicylic acid loop in plant defense. | Current opinion in plant biology 20030801 |
| An engineered chorismate mutase with allosteric regulation. | Bioorganic & medicinal chemistry 20030717 |
| Contributions of conformational compression and preferential transition state stabilization to the rate enhancement by chorismate mutase. | Journal of the American Chemical Society 20030611 |
| Investigation of solvent effects for the Claisen rearrangement of chorismate to prephenate: mechanistic interpretation via near attack conformations. | Journal of the American Chemical Society 20030604 |
| A novel strategy for the assignment of side-chain resonances in completely deuterated large proteins using 13C spectroscopy. | Journal of biomolecular NMR 20030601 |
| Regulation of anthraquinone biosynthesis in cell cultures of Morinda citrifolia. | Journal of plant physiology 20030601 |
| Structure and mechanism of Pseudomonas aeruginosa PhzD, an isochorismatase from the phenazine biosynthetic pathway. | Biochemistry 20030520 |
| HutC/FarR-like bacterial transcription factors of the GntR family contain a small molecule-binding domain of the chorismate lyase fold. | FEMS microbiology letters 20030516 |
| Charge optimization increases the potency and selectivity of a chorismate mutase inhibitor. | Journal of the American Chemical Society 20030514 |
| Comparison of formation of reactive conformers (NACs) for the Claisen rearrangement of chorismate to prephenate in water and in the E. coli mutase: the efficiency of the enzyme catalysis. | Journal of the American Chemical Society 20030514 |
| Isochorismate synthase (PchA), the first and rate-limiting enzyme in salicylate biosynthesis of Pseudomonas aeruginosa. | The Journal of biological chemistry 20030509 |
| Quinic acid induces hypovirulence and expression of a hypovirulence-associated double-stranded RNA in Rhizoctonia solani. | Current genetics 20030501 |
| Genetic organization of an Acinetobacter baumannii chromosomal region harbouring genes related to siderophore biosynthesis and transport. | Microbiology (Reading, England) 20030501 |
| A chorismate mutase from the soybean cyst nematode Heterodera glycines shows polymorphisms that correlate with virulence. | Molecular plant-microbe interactions : MPMI 20030501 |
| On the generation of catalytic antibodies by transition state analogues. | Chembiochem : a European journal of chemical biology 20030404 |
| Understanding the role of active-site residues in chorismate mutase catalysis from molecular-dynamics simulations. | Angewandte Chemie (International ed. in English) 20030404 |
| Selective stabilization of the chorismate mutase transition state by a positively charged hydrogen bond donor. | Journal of the American Chemical Society 20030319 |
| Crystallization and preliminary X-ray crystallographic studies of chorismate synthase from Helicobacter pylori. | Acta crystallographica. Section D, Biological crystallography 20030301 |
| Construction and complementation of the first auxotrophic mutant in the spirochaete Leptospira meyeri. | Microbiology (Reading, England) 20030301 |
| Preorganization and reorganization as related factors in enzyme catalysis: the chorismate mutase case. | Chemistry (Weinheim an der Bergstrasse, Germany) 20030217 |
| Enzymes do what is expected (chalcone isomerase versus chorismate mutase). | Journal of the American Chemical Society 20030212 |
| QM/MM calculations of kinetic isotope effects in the chorismate mutase active site. | Organic & biomolecular chemistry 20030207 |
| Meloidogyne javanica chorismate mutase 1 alters plant cell development. | Molecular plant-microbe interactions : MPMI 20030201 |
| Mapping of chorismate mutase and prephenate dehydrogenase domains in the Escherichia coli T-protein. | European journal of biochemistry 20030201 |
| Deletion of Aspergillus nidulans aroC using a novel blaster module that combines ET cloning and marker rescue. | Molecular genetics and genomics : MGG 20030201 |
| A new strategy for backbone resonance assignment in large proteins using a MQ-HACACO experiment. | Journal of biomolecular NMR 20030201 |
| Metabolic engineering. Researchers create first autonomous synthetic life form. | Science (New York, N.Y.) 20030131 |
| Solution structure and functional ligand screening of HI0719, a highly conserved protein from bacteria to humans in the YjgF/YER057c/UK114 family. | Biochemistry 20030114 |
| Microarray analysis of orthologous genes: conservation of the translational machinery across species at the sequence and expression level. | Genome biology 20030101 |
| Lateral gene transfer and ancient paralogy of operons containing redundant copies of tryptophan-pathway genes in Xylella species and in heterocystous cyanobacteria. | Genome biology 20030101 |
| Horizontally transferred genes in plant-parasitic nematodes: a high-throughput genomic approach. | Genome biology 20030101 |
| Characterization of a chorismate mutase from the potato cyst nematode Globodera pallida. | Molecular plant pathology 20030101 |
| Longitudinal (1)H relaxation optimization in TROSY NMR spectroscopy. | Journal of the American Chemical Society 20021030 |
| The common aromatic amino acid biosynthesis pathway is essential in Mycobacterium tuberculosis. | Microbiology (Reading, England) 20021001 |
| Investigation of the enzymatic and nonenzymatic cope rearrangement of carbaprephenate to carbachorismate. | The Journal of organic chemistry 20020920 |
| Direct NMR observation and DFT calculations of a hydrogen bond at the active site of a 44 kDa enzyme. | Journal of biomolecular NMR 20020901 |
| High level expression of chorismate pyruvate-lyase (UbiC) and HMG-CoA reductase in hairy root cultures of Lithospermum erythrorhizon. | Plant & cell physiology 20020801 |
| Salicylate biosynthesis in Pseudomonas aeruginosa. Purification and characterization of PchB, a novel bifunctional enzyme displaying isochorismate pyruvate-lyase and chorismate mutase activities. | The Journal of biological chemistry 20020614 |
| Thermodynamics of reactions catalyzed by PABA synthase. | Biophysical chemistry 20020410 |
| Probing the overlap of chorismate mutase and prephenate dehydrogenase sites in the escherichia coli T-protein: a dehydrogenase-selective inhibitor. | Bioorganic & medicinal chemistry letters 20020325 |
| The correct phylogenetic relationship of KdsA (3-deoxy-d-manno-octulosonate 8-phosphate synthase) with one of two independently evolved classes of AroA (3-deoxy-d-arabino-heptulosonate 7-phosphate synthase). | Journal of molecular evolution 20020301 |
| Examination of Salmonella gene expression in an infected mammalian host using the green fluorescent protein and two-colour flow cytometry. | Molecular microbiology 20020301 |
| Structure of Escherichia coli aminodeoxychorismate synthase: architectural conservation and diversity in chorismate-utilizing enzymes. | Biochemistry 20020219 |
| The shikimate pathway and its branches in apicomplexan parasites. | The Journal of infectious diseases 20020215 |
| A genetic algorithm for the identification of conformationally invariant regions in protein molecules. | Acta crystallographica. Section D, Biological crystallography 20020201 |
| RNA interference (RNAi) inhibits growth of Plasmodium falciparum. | Molecular and biochemical parasitology 20020201 |
| Chorismate lyase: kinetics and engineering for stability. | Biochimica et biophysica acta 20020131 |
| Biosynthesis of anthraquinones in cell cultures of Cinchona 'Robusta' proceeds via the methylerythritol 4-phosphate pathway. | Phytochemistry 20020101 |
| Significance of two distinct types of tryptophan synthase beta chain in Bacteria, Archaea and higher plants. | Genome biology 20020101 |
| Evolution of gene fusions: horizontal transfer versus independent events. | Genome biology 20020101 |
| Nonlinear dynamics of regulation of bacterial trp operon: model analysis of integrated effects of repression, feedback inhibition, and attenuation. | Biotechnology progress 20020101 |
| Dynamic diversity of the tryptophan pathway in chlamydiae: reductive evolution and a novel operon for tryptophan recapture. | Genome biology 20020101 |
| Clustering of isochorismate synthase genes menF and entC and channeling of isochorismate in Escherichia coli. | Biochimica et biophysica acta 20011230 |
| Microbial synthesis of p-hydroxybenzoic acid from glucose. | Biotechnology and bioengineering 20011201 |
| Isochorismate synthase is required to synthesize salicylic acid for plant defence. | Nature 20011129 |
| Spectroscopic and kinetic characterization of the bifunctional chorismate synthase from Neurospora crassa: evidence for a common binding site for 5-enolpyruvylshikimate 3-phosphate and NADPH. | The Journal of biological chemistry 20011116 |
| Studies on 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase using chorismate mutase inhibitors. | Bioorganic & medicinal chemistry letters 20011105 |
| The gene cluster for chloramphenicol biosynthesis in Streptomyces venezuelae ISP5230 includes novel shikimate pathway homologues and a monomodular non-ribosomal peptide synthetase gene. | Microbiology (Reading, England) 20011001 |
| Ubiquinone biosynthesis in microorganisms. | FEMS microbiology letters 20010925 |
| A selective inhibitor of Escherichia coli prephenate dehydratase. | Bioorganic & medicinal chemistry letters 20010917 |
| The crystal structure of chorismate lyase shows a new fold and a tightly retained product. | Proteins 20010815 |
| New insights into the metal center of 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase. | Biochemistry 20010727 |
| The biosynthesis of shikimate metabolites. | Natural product reports 20010601 |
| TROSY NMR with partially deuterated proteins. | Journal of biomolecular NMR 20010601 |
| Chorismate synthase from the hyperthermophile Thermotoga maritima combines thermostability and increased rigidity with catalytic and spectral properties similar to mesophilic counterparts. | The Journal of biological chemistry 20010525 |
| Subcellular localization and characterization of chorismate synthase in the apicomplexan Plasmodium falciparum. | Molecular microbiology 20010401 |
| Anthranilate synthase without an LLES motif from a hyperthermophilic archaeon is inhibited by tryptophan. | Biochemical and biophysical research communications 20010309 |
| A hybrid potential reaction path and free energy study of the chorismate mutase reaction. | Journal of the American Chemical Society 20010227 |
| Biosynthesis of menaquinone (vitamin K2) and ubiquinone (coenzyme Q): a perspective on enzymatic mechanisms. | Vitamins and hormones 20010101 |
| Manipulation of salicylate content in Arabidopsis thaliana by the expression of an engineered bacterial salicylate synthase. | The Plant journal : for cell and molecular biology 20010101 |
| A metabolic node in action: chorismate-utilizing enzymes in microorganisms. | Critical reviews in microbiology 20010101 |
| The emerging periplasm-localized subclass of AroQ chorismate mutases, exemplified by those from Salmonella typhimurium and Pseudomonas aeruginosa. | Genome biology 20010101 |
| CASP2 knowledge-based approach to distant homology recognition and fold prediction in CASP4. | Proteins 20010101 |
| Escherichia coli chorismate synthase catalyzes the conversion of (6S)-6-fluoro-5-enolpyruvylshikimate-3-phosphate to 6-fluorochorismate. Implications for the enzyme mechanism and the antimicrobial action of (6S)-6-fluoroshikimate. | The Journal of biological chemistry 19950929 |
| Biosynthesis of o-succinylbenzoic acid in Bacillus subtilis: identification of menD mutants and evidence against the involvement of the alpha-ketoglutarate dehydrogenase complex. | Journal of bacteriology 19940501 |
| Routes to catalysis: structure of a catalytic antibody and comparison with its natural counterpart. | Science (New York, N.Y.) 19940204 |
| para-aminobenzoate synthesis from chorismate occurs in two steps. | The Journal of biological chemistry 19890525 |
| Vitamin K (menaquinone) biosynthesis in bacteria: high-performance liquid chromatographic assay of the overall synthesis of o-succinylbenzoic acid and of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase. | Analytical biochemistry 19890501 |
| Biosynthesis of o-succinylbenzoic acid. I: Cell free synthesis of o-succinylbenzoic acid from isochorismic acid in enzyme preparations from vitamin K producing bacteria. | Archives of biochemistry and biophysics 19870701 |
| Incorporation of chorismic acid and 4-aminobenzoic acid into the 4-hydroxyaniline moiety of N-(gamma-L-glutamyl)-4-hydroxyaniline in Agaricus bisporus. | Biochimica et biophysica acta 19850618 |